CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41193	Canola	cytosol	98.31	98.31
CDX98401	Canola	cytosol	96.11	96.11
CDX67820	Canola	cytosol	95.95	95.95
AT3G59970.3	Thale cress	cytosol	94.09	94.09
CDY17879	Canola	cytosol	84.29	84.01
CDX79777	Canola	cytosol	83.95	83.53
CDY23420	Canola	cytosol	82.77	82.35
CDY30457	Canola	cytosol	82.77	82.35
KRH56478	Soybean	cytosol, nucleus	80.57	80.17
Zm00001d012999_P001	Maize	cytosol	38.68	79.79
KRH64810	Soybean	cytosol, endoplasmic reticulum, nucleus	80.24	79.7
PGSC0003DMT400041701	Potato	cytosol	79.73	79.46
Solyc11g008870.1.1	Tomato	extracellular, plastid	79.73	79.46
PGSC0003DMT400060046	Potato	cytosol	79.05	78.39
GSMUA_Achr11P...	Banana	cytosol	73.14	78.16
Solyc05g055730.2.1	Tomato	cytosol, unclear	78.55	78.02
GSMUA_Achr7P21790_001	Banana	cytosol	78.38	77.98
EER90654	Sorghum	cytosol	78.04	77.91
Os03t0815200-01	Rice	cytosol, extracellular, nucleus, plasma membrane	77.53	77.27
TraesCS5B01G481000.1	Wheat	cytosol	76.69	76.43
TraesCS5A01G468400.1	Wheat	cytosol, golgi, unclear	76.35	76.09
TraesCS5D01G481300.1	Wheat	cytosol	76.35	76.09
HORVU5Hr1G111620.1	Barley	cytosol	76.18	75.93
Zm00001d034602_P003	Maize	cytosol	75.17	71.2
VIT_05s0094g01600.t01	Wine grape	cytosol	8.11	58.54
Zm00001d042247_P001	Maize	extracellular, golgi	9.97	50.43
Zm00001d013002_P001	Maize	golgi, mitochondrion	9.63	48.72

Protein Annotations

KEGG:00670+1.5.1.20	KEGG:00720+1.5.1.20	Gene3D:3.20.20.220	MapMan:7.5.7.4	GO:A0A078C4T0	EnsemblPlants:CDX71855
ProteinID:CDX71855	ProteinID:CDX71855.1	InterPro:FAD-linked_oxidoreductase-like	InterPro:Fadh2_euk	GO:GO:0003674	GO:GO:0003824
GO:GO:0004489	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006555	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009086	GO:GO:0009987
GO:GO:0035999	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00155584001	InterPro:MTHF_reductase_bac	InterPro:Mehydrof_redctse	PFAM:PF02219
PANTHER:PTHR21091	PANTHER:PTHR21091:SF31	MetaCyc:PWY-2201	MetaCyc:PWY-3841	SUPFAM:SSF51730	TIGRFAMs:TIGR00676
TIGRFAMs:TIGR00677	UniPathway:UPA00193	UniParc:UPI0004EE2984	:	:	:

Description

BnaC08g30190D

Coordinates

chrLK031795:-:858479..861719

Molecular Weight (calculated)

66223.1 Da

IEP (calculated)

5.595

GRAVY (calculated)

-0.244

Length

592 amino acids

Sequence
(BLAST)

001: MKVVDKIKSA TEQGQTAFSF EFFPPKTEDG VENLFERMDR LVSYGPSFCD ITWGAGGSTA DLTLEIASRM QNAICVETMM HLTCTNMPVE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFAC ALDLVNHIKS KYGDYFGITV AGYPEAHPDV IEADGLATPE SYQSDLAYLK KKVDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGINCPVVPG IMPISNYKGF LRMAGFCKTK IPAELTAALE PIKDNEEAVK AFGIHFATEM CKKILAHGIS TLHIYTLNMD KSAIGILMIL
301: GLIDESKITR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWNDFP QGRWGDSRSA SYGTLSDYQF MRPRARDKKL QQEWVVPLKG IEDVQEKFKE
401: LCLGSLKSSP WSELDGLQPE TKIINEKLGK INSNGFLTIN SQPSVNAAKS DSPAIGWGGP GGYVYQKAYL EFFCSKDKLD TFMEKSKAFP SITYMAVNKA
501: GNWVSNVGEA DVNAVTWGVF PAKEIIQPTI VDPASFKVWK DEAFEIWSRS WANLYPEDDP SRKLLEEVKN SYFLVSLVDN DYINGDIFSI FA

Best Arabidopsis Sequence Match ( AT3G59970.3 )
(BLAST)

001: MKVVDKIKSV TEQGQTAFSF EFFPPKTEDG VENLFERMDR LVSYGPTFCD ITWGAGGSTA DLTLEIASRM QNVICVETMM HLTCTNMPIE KIDHALETIR
101: SNGIQNVLAL RGDPPHGQDK FVQVEGGFAC ALDLVNHIRS KYGDYFGITV AGYPEAHPDV IEADGLATPE SYQSDLAYLK KKVDAGADLI VTQLFYDTDI
201: FLKFVNDCRQ IGINCPIVPG IMPISNYKGF LRMAGFCKTK IPAELTAALE PIKDNDEAVK AYGIHFATEM CKKILAHGIT SLHLYTLNVD KSAIGILMNL
301: GLIDESKISR SLPWRRPANV FRTKEDVRPI FWANRPKSYI SRTKGWNDFP HGRWGDSHSA AYSTLSDYQF ARPKGRDKKL QQEWVVPLKS IEDVQEKFKE
401: LCIGNLKSSP WSELDGLQPE TKIINEQLGK INSNGFLTIN SQPSVNAAKS DSPAIGWGGP GGYVYQKAYL EFFCSKDKLD TLVEKSKAFP SITYMAVNKS
501: ENWVSNTGES DVNAVTWGVF PAKEVIQPTI VDPASFKVWK DEAFEIWSRS WANLYPEDDP SRKLLEEVKN SYYLVSLVDN NYINGDIFSV FA

Arabidopsis Description

MTHFR1Methylenetetrahydrofolate reductase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SE60]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.