CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048358_P002	Maize	plastid	96.97	97.17
Zm00001d027558_P003	Maize	plastid	96.67	93.55
Os03t0136900-01	Rice	mitochondrion	92.33	92.8
HORVU4Hr1G080640.1	Barley	mitochondrion	85.87	91.9
TraesCS4B01G335100.1	Wheat	endoplasmic reticulum	73.46	91.11
TraesCS5A01G505000.2	Wheat	golgi	89.51	89.15
Bra011642.1-P	Field mustard	cytosol	75.58	83.41
KRH28848	Soybean	cytosol, nucleus	75.78	83.35
CDX69174	Canola	cytosol	75.68	83.24
VIT_00s0264g00030.t01	Wine grape	mitochondrion	77.09	83.22
Bra010508.1-P	Field mustard	cytosol	75.38	83.18
AT4G35830.1	Thale cress	cytosol	75.38	83.18
GSMUA_Achr11P...	Banana	plastid	82.74	83.16
KRH76600	Soybean	endoplasmic reticulum	75.58	83.13
CDY41626	Canola	cytosol	75.08	82.21
CDX75532	Canola	cytosol	76.19	81.62
CDY24823	Canola	cytosol	75.38	81.02
EES14669	Sorghum	plastid	79.41	79.02
GSMUA_Achr11P...	Banana	plastid	78.1	77.32
EER97286	Sorghum	mitochondrion	71.95	72.83
EES10322	Sorghum	cytosol	66.4	72.79
CDX91508	Canola	cytosol	5.85	70.73
CDY44621	Canola	cytosol	6.46	64.65
EES06213	Sorghum	plastid	10.8	21.1

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	MapMan:2.3.2
Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	EntrezGene:8057404	ProteinID:ABE77202.1
InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS
InterPro:Aconitase_4Fe-4S_dom	EnsemblPlants:EER92899	ProteinID:EER92899	ProteinID:EER92899.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0003994	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575
GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773
GO:GO:0005829	GO:GO:0005886	GO:GO:0006101	GO:GO:0006102	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009506	GO:GO:0009605	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987
GO:GO:0009991	GO:GO:0016020	GO:GO:0016829	GO:GO:0048027	GO:GO:0048046	GO:GO:0051536
GO:GO:0051539	GO:GO:1990641	InterPro:IPR015928	InterPro:IPR015931	PFAM:PF00330	PFAM:PF00694
PRINTS:PR00415	ScanProsite:PS00450	ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF49	UniProt:Q1KSB0
EnsemblPlantsGene:SORBI_3001G512800	SUPFAM:SSF52016	SUPFAM:SSF53732	unigene:Sbi.10975	TIGRFAMs:TIGR01341	UniParc:UPI0000D6594C
RefSeq:XP_002465901.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:78059034..78066937

Molecular Weight (calculated)

106987.0 Da

IEP (calculated)

7.079

GRAVY (calculated)

-0.183

Length

991 amino acids

Sequence
(BLAST)

001: MPPLTSSLLS RSTTGGSSAR GVAAAAAISR PAADAAPSSS SPPARSTPTP RPRPSTASPF ASGLAGRLFG GHRAAARSAS SATAVFERRF ASAATRNTYD
101: EILTGLKRPG AGDEFGKYYS LPALSDPRID RLPYSIRILL ESAIRNCDDF QVTGNDVEKI LDWEKSAPKL VEIPFKPARV LLQDFTGVPA VVDLACMRDA
201: MSKLGSDPNK INPLVPVDLV IDHSVQVDVA RSANAAQANM ELEFHRNKER FGFLKWGSSA FRNMLVVPPG SGIVHQVNLE YLARVVFNNG GILYPDSVVG
301: TDSHTTMIDG LGVAGWGVGG IEAEAAMLGQ PMSMVLPGVV GFKLSGKLKN GVTATDLVLT VTQMLRKHGV VGKFVEFYGQ GMSELSLADR ATIANMSPEY
401: GATMGFFPVD AKTLDYLKLT GRSDDTVAMV ESYLRANKMF VDHSQVEAER VYSSYLELNL EEVEPCLSGP KRPHDRVTLK NMKSDWLSCL DSDVGFKGFA
501: VPKESQGKVA EFSFHGTPAK IKHGDVVIAA ITSCTNTSNP NVMLGAALVA KKACELGLEV KPWIKTSLAP GSGVVKKYLD KSGLQKYLDQ LGFHIVGYGC
601: TTCIGNSGEL DESVSAAITE NDVVAAAVLS GNRNFEGRVH PLTRANYLAS PPLVVAYALA GTVNIDFEKE PIGISKDGKE VYFRDVWPST EEIAEVVKSS
701: VLPDMFKSTY ESITKGNPMW NELSVSTSTL YPWDPTSTYI HEPPYFKDMT MTPPGPRPVK DAYCLLNFGD SITTDHISPA GNIHPDSPAA KYLKERGVER
801: KDFNSYGSRR GNDEIMARGT FANIRLVNKF LKGEVGPKTI HVPSGEKLAV FDAAMKYKNE GHDTIILAGA EYGSGSSRDW AAKGPMLQGV KAVIAKSFER
901: IHRSNLAGMG IIPLCFKAGE DADTLGLTGH ERYTVHLPTN VSEIKPGQDV TVTTDNGKSF TCTLRFDTEV ELAYYDHGGI LPYVTRKIAE Q

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.