CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91508	Canola	cytosol	75.76	91.46
CDY41626	Canola	cytosol	86.87	9.5
Bra010508.1-P	Field mustard	cytosol	85.86	9.47
AT4G35830.1	Thale cress	cytosol	84.85	9.35
CDY24823	Canola	cytosol	85.86	9.22
CDX69174	Canola	cytosol	83.84	9.21
CDX75532	Canola	cytosol	83.84	8.97
VIT_00s0264g00030.t01	Wine grape	mitochondrion	76.77	8.28
KRH28848	Soybean	cytosol, nucleus	74.75	8.21
KRH76600	Soybean	endoplasmic reticulum	73.74	8.1
GSMUA_Achr11P...	Banana	plastid	74.75	7.51
CDY18054	Canola	plastid	73.74	7.4
HORVU4Hr1G080640.1	Barley	mitochondrion	68.69	7.34
CDX97969	Canola	plastid	72.73	7.27
CDX93088	Canola	plastid	72.73	7.24
CDY50945	Canola	plastid	72.73	7.24
GSMUA_Achr11P...	Banana	plastid	71.72	7.09
CDY56501	Canola	plastid	69.7	7.09
Os03t0136900-01	Rice	mitochondrion	68.69	6.9
TraesCS5A01G505000.2	Wheat	golgi	68.69	6.83
Zm00001d048358_P002	Maize	plastid	67.68	6.77
CDY66424	Canola	mitochondrion	67.68	6.73
CDY14291	Canola	mitochondrion, plastid	67.68	6.73
Zm00001d027558_P003	Maize	plastid	67.68	6.54
EER92899	Sorghum	plastid	64.65	6.46
CDX87247	Canola	cytosol	3.03	2.11
CDY43713	Canola	plastid	9.09	1.79
CDY56070	Canola	plastid	9.09	1.78
CDY01130	Canola	plastid	9.09	1.77
CDY47367	Canola	plastid	9.09	1.77
TraesCS4B01G335100.1	Wheat	endoplasmic reticulum	8.08	1.0
CDY19879	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:3.30.499.20	MapMan:35.1
GO:A0A078I414	UniProt:A0A078I414	InterPro:Aconitase/IRP2	InterPro:Aconitase_4Fe-4S_dom	EnsemblPlants:CDY44621	ProteinID:CDY44621
ProteinID:CDY44621.1	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00080570001	PANTHER:PTHR11670	PANTHER:PTHR11670:SF52
SUPFAM:SSF53732	UniPathway:UPA00048	UniParc:UPI0004EDB9AE	:	:	:

Description

BnaC04g06410DBnaC04g06410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I414]

Coordinates

chrLK032597:-:6846..7469

Molecular Weight (calculated)

11400.6 Da

IEP (calculated)

6.598

GRAVY (calculated)

-0.417

Length

99 amino acids

Sequence
(BLAST)

1: MDTCSLQFPS ENPFRSILKT LDDGGKFGNY YSLRALNDSR IDKLPYSIRI LLESAIRNCD EFQVKSKDVE KILDWENTSP KQVEIPFKPA RVLLQVFTG

Best Arabidopsis Sequence Match ( AT4G35830.1 )
(BLAST)

001: MASENPFRSI LKALEKPDGG EFGNYYSLPA LNDPRIDKLP YSIRILLESA IRNCDEFQVK SKDVEKILDW ENTSPKQVEI PFKPARVLLQ DFTGVPAVVD
101: LACMRDAMNN LGGDSNKINP LVPVDLVIDH SVQVDVARSE NAVQANMELE FQRNKERFAF LKWGSNAFHN MLVVPPGSGI VHQVNLEYLA RVVFNTNGLL
201: YPDSVVGTDS HTTMIDGLGV AGWGVGGIEA EATMLGQPMS MVLPGVVGFK LTGKLRDGMT ATDLVLTVTQ MLRKHGVVGK FVEFHGEGMR ELSLADRATI
301: ANMSPEYGAT MGFFPVDHVT LQYLRLTGRS DDTVSMIEAY LRANKMFVDY SEPESKTVYS SCLELNLEDV EPCVSGPKRP HDRVPLKEMK ADWHSCLDNR
401: VGFKGFAVPK EAQSKAVEFN FNGTTAQLRH GDVVIAAITS CTNTSNPSVM LGAALVAKKA CDLGLEVKPW IKTSLAPGSG VVTKYLAKSG LQKYLNQLGF
501: SIVGYGCTTC IGNSGDIHEA VASAIVDNDL VASAVLSGNR NFEGRVHPLT RANYLASPPL VVAYALAGTV DIDFETQPIG TGKDGKQIFF RDIWPSNKEV
601: AEVVQSSVLP DMFKATYEAI TKGNSMWNQL SVASGTLYEW DPKSTYIHEP PYFKGMTMSP PGPHGVKDAY CLLNFGDSIT TDHISPAGSI HKDSPAAKYL
701: MERGVDRRDF NSYGSRRGND EIMARGTFAN IRIVNKHLKG EVGPKTVHIP TGEKLSVFDA AMKYRNEGRD TIILAGAEYG SGSSRDWAAK GPMLLGVKAV
801: ISKSFERIHR SNLVGMGIIP LCFKAGEDAE TLGLTGQELY TIELPNNVSE IKPGQDVTVV TNNGKSFTCT LRFDTEVELA YFDHGGILQY VIRNLIKQ

Arabidopsis Description

ACO1Aconitate hydratase [Source:UniProtKB/TrEMBL;Acc:A0A178V2T4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.