CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93088	Canola	plastid	96.96	96.18
CDX97969	Canola	plastid	96.55	96.06
CDY50945	Canola	plastid	96.55	95.68
AT2G05710.1	Thale cress	plastid	93.31	92.93
CDY56501	Canola	plastid	89.45	90.65
CDX69174	Canola	cytosol	78.3	85.68
CDY41626	Canola	cytosol	78.09	85.08
KRH15702	Soybean	mitochondrion	17.04	84.0
KRH22567	Soybean	mitochondrion	83.77	83.94
CDY24823	Canola	cytosol	78.4	83.84
PGSC0003DMT400022547	Potato	mitochondrion, plastid	83.37	83.79
CDX75532	Canola	cytosol	78.6	83.78
KRH26786	Soybean	mitochondrion	83.47	83.64
Solyc12g005860.1.1	Tomato	extracellular, plastid	83.16	83.59
KRH56130	Soybean	mitochondrion	82.96	83.55
VIT_12s0059g02150.t01	Wine grape	plastid	83.57	83.49
KRH25376	Soybean	mitochondrion	83.16	83.33
Solyc07g052350.2.1	Tomato	plastid	83.98	83.22
PGSC0003DMT400074489	Potato	cytosol, extracellular	83.67	82.75
CDX91508	Canola	cytosol	6.49	78.05
CDY66424	Canola	mitochondrion	78.7	77.99
CDY14291	Canola	mitochondrion, plastid	78.7	77.99
CDY44621	Canola	cytosol	7.4	73.74
CDY19879	Canola	mitochondrion	3.65	41.86
CDY43713	Canola	plastid	11.26	22.02
CDY56070	Canola	plastid	11.26	21.98
CDY01130	Canola	plastid	11.26	21.85
CDY47367	Canola	plastid	11.16	21.61
CDX87247	Canola	cytosol	2.23	15.49

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	MapMan:2.3.2
Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	GO:A0A078FY71	UniProt:A0A078FY71
InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS
InterPro:Aconitase_4Fe-4S_dom	EnsemblPlants:CDY18054	ProteinID:CDY18054	ProteinID:CDY18054.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0003994	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016829
GO:GO:0051536	GO:GO:0051539	EnsemblPlantsGene:GSBRNA2T00002506001	InterPro:IPR015928	InterPro:IPR015931	PFAM:PF00330
PFAM:PF00694	PRINTS:PR00415	ScanProsite:PS00450	ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF50
SUPFAM:SSF52016	SUPFAM:SSF53732	TIGRFAMs:TIGR01341	UniPathway:UPA00048	UniParc:UPI0004EE5FCB	SEG:seg

Description

BnaC07g04160DAconitate hydratase [Source:UniProtKB/TrEMBL;Acc:A0A078FY71]

Coordinates

chrLK032081:-:539010..543632

Molecular Weight (calculated)

107591.0 Da

IEP (calculated)

7.287

GRAVY (calculated)

-0.186

Length

986 amino acids

Sequence
(BLAST)

001: MYKNASSSIL RAASSRSLRS SLTSSSASAA ASPCSLVGQR SFATYSPAFR SLARWSHCLH SRPSPFRLSS QIRTASPVLD RLEKNFSSMA SEHPFKGILT
101: TLPKPGGGEF GKFYSLPALN DSRIDKLPYT IRILLESAIR NCDNFQVTKE DVEKIIDWEK TAPKQVEIPF KPARVLLQDF TGVPAVVDLA CMRDAMNKLG
201: SDSNKINPLV PVDLVIDHSV QVDVARSENA VQANMELEFQ RNKERFAFLK WGSTAFHNML VVPPGSGIVH QVNLEYLGRV VFNTQGVLYP DSVVGTDSHT
301: TMIDGLGVAG WGVGGIEAEA TMLGQPMSMV LPGVVGFKLS GKMRNGVTAT DLVLTVTQIL RKHGVVGKFV EFYGDGMSGL SLADRATIAN MSPEYGATMG
401: FFPVDHVTLQ YLKLTGRSDE TVAMIEAYLR ANNMFVDYSE PQQERAYSSY LELNLDNVEP CISGPKRPHD RVPLKEMKAD WNSCLDNKVG FKGFAIPKKA
501: QEKVANFSFN GKPAEIKHGS VVIAAITSCT NTSNPSVMLG AGLVAKKACD LGLQVKPWIK TSLAPGSGVV TKYLLKSGLQ EYLNQQGFNI VGYGCTTCIG
601: NSGEINESVG VAITENDIVV AAVLSGNRNF EGRVHPLTRA NYLASPPLVV AYALAGTVNI DFETEPIGTG KNGKEVFLRD IWPTTEEIAE VVQSSVLPDM
701: FRATYESITK GNPMWNELSV PENTLYSWDP KSTYIHEPPY FKDMTMDPPG PHSVKDAYCL LNFGDSITTD HISPAGNIQK DSPAAKYLME RGVDRKDFNS
801: YGSRRGNDEI MARGTFANIR IVNKLMNGEV GPKTVHIPSG EKLSVFDAAM RYKSSGEDTI ILAGAEYGSG SSRDWAAKGP MLQGVKAVIA KSFERIHRSN
901: LVGMGIIPLC FKSGEDADSL GLTGHERYTI HLPTDISEIR PGQDVTVTTD NGKSFTCTVR FDTEVELAYF NHGGILPYVI RNLSKQ

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.