CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18054	Canola	plastid	90.65	89.45
CDX93088	Canola	plastid	90.44	88.53
CDX97969	Canola	plastid	90.13	88.5
CDY50945	Canola	plastid	89.93	87.94
AT2G05710.1	Thale cress	plastid	88.08	86.57
CDX69174	Canola	cytosol	74.2	80.13
KRH15702	Soybean	mitochondrion	16.44	80.0
CDY41626	Canola	cytosol	74.1	79.67
KRH56130	Soybean	mitochondrion	79.34	78.86
KRH22567	Soybean	mitochondrion	79.65	78.76
KRH26786	Soybean	mitochondrion	79.55	78.66
KRH25376	Soybean	mitochondrion	79.55	78.66
CDY24823	Canola	cytosol	74.31	78.42
CDX75532	Canola	cytosol	74.51	78.38
PGSC0003DMT400022547	Potato	mitochondrion, plastid	78.83	78.19
VIT_12s0059g02150.t01	Wine grape	plastid	79.24	78.12
Solyc12g005860.1.1	Tomato	extracellular, plastid	78.62	77.98
Solyc07g052350.2.1	Tomato	plastid	79.44	77.69
PGSC0003DMT400074489	Potato	cytosol, extracellular	79.34	77.43
CDX91508	Canola	cytosol	6.47	76.83
Bra015165.1-P	Field mustard	plastid	79.24	75.89
CDY66424	Canola	mitochondrion	74.61	72.96
CDY14291	Canola	mitochondrion, plastid	74.61	72.96
CDY44621	Canola	cytosol	7.09	69.7
CDY19879	Canola	mitochondrion	3.29	37.21
CDY43713	Canola	plastid	11.2	21.63
CDY56070	Canola	plastid	11.2	21.58
CDY01130	Canola	plastid	11.2	21.46
CDY47367	Canola	plastid	11.1	21.22
CDX87247	Canola	cytosol	1.95	13.38

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	MapMan:2.3.2
Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	GO:A0A078J0K6	UniProt:A0A078J0K6
InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS
InterPro:Aconitase_4Fe-4S_dom	EnsemblPlants:CDY56501	ProteinID:CDY56501	ProteinID:CDY56501.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0003994	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016829
GO:GO:0051536	GO:GO:0051539	EnsemblPlantsGene:GSBRNA2T00019645001	InterPro:IPR015928	InterPro:IPR015931	PFAM:PF00330
PFAM:PF00694	PRINTS:PR00415	ScanProsite:PS00450	ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF50
SUPFAM:SSF52016	SUPFAM:SSF53732	TIGRFAMs:TIGR01341	UniPathway:UPA00048	UniParc:UPI0004EF0DDB	SEG:seg

Description

BnaAnng14360DAconitate hydratase [Source:UniProtKB/TrEMBL;Acc:A0A078J0K6]

Coordinates

chrLK033494:-:27355..32024

Molecular Weight (calculated)

106855.0 Da

IEP (calculated)

8.293

GRAVY (calculated)

-0.118

Length

973 amino acids

Sequence
(BLAST)

001: MYKNAFSSIL RAASARSFRS SLTPSSSAAS PCSLLSQRSF ATSSPAFRSL PRWSHCLHSR PSLFRLSSHI RTASPVLDRL ERNFSSMASE HHPFKGIFTT
101: LPKPGGGEFG KFYSLPALND PRIDKLPYYI RILLESAIRN CDNFQVTKED VEKIIDWEKT SPKQVEIPFK LARVLLQDFT GVPAVVYLAC MRDAMNKLGS
201: DSNKINPLVP VDLVIDHSVQ VDVARSKNAV QANMELEFQR SKERFAFLKW GSTAFQNMFV VPPGSGIVHQ VTLLQFAINL EYLGRVVFNT QGVLYPHSVV
301: GNDSHTTMIN GLGVAGWGVG GIEAEAKMLG QPMSMVLPGV VGFKLSGKMR NGVTATDLVL TVTQILRKHG VVGKFVEFYG DGMSGLSLAD RATIANMSPE
401: YGVTMGFFPV DHVTLQYLKL TGRSDETVAM IEAYLRANNM FVDYNEPQQE RAYSSYLELN LDNFKPCISG PKRPHDRVPL KEMKADWNSC LGNKVGFKGF
501: AIPKEAQEKV ANFSFNGKSA KIKHGSVVIA AITSCTNTSN QSVMLGAGLV AKKACDLGLQ VKPWIKTSLA PGLGVVTKYF LKRYVVVFSS FFVGFNIVGY
601: GCTTCIGNSG EINESVGVAI TENDIVAAAV LSGNRNFEGR VHPLTRANYL ASPPLVVAYA LAGTVNIDFE TEPIGTGKNG KEVFLRDIWP TTEEIAEVVQ
701: SSVLPDMFRA TYESITKGNP MWNELYVPEN TLYSWDPKST YIHEPPYFKD MTMDPPGPHS VKDAYCLLNF SDSITTDHIS PTGNIQKDSP AAKYLMERGV
801: DRKDFNSYGS HRGNDEIMAR GTLANIRIVN KLINGEVGPK TVHIPSGEKL SVFDASMRYK SSGEDTIILA GAEYGSGSSR DWAVKGPMLQ CVKVVIAKSF
901: ERIHRSNLVE MGIIPLCFKS GEDADSLGLT DVTVTTDNGK SFTCTVHFDT EVELAYFNHG GILPYVIGNL SKQ

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.