CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019845.1-P	Field mustard	plastid	99.6	99.6
CDX93088	Canola	plastid	99.5	99.2
CDY50945	Canola	plastid	99.09	98.69
CDY18054	Canola	plastid	96.06	96.55
AT2G05710.1	Thale cress	plastid	94.35	94.44
CDY56501	Canola	plastid	88.5	90.13
CDX69174	Canola	cytosol	78.2	86.02
CDY41626	Canola	cytosol	77.8	85.19
KRH22567	Soybean	mitochondrion	84.06	84.65
KRH26786	Soybean	mitochondrion	83.96	84.55
KRH56130	Soybean	mitochondrion	83.35	84.37
KRH25376	Soybean	mitochondrion	83.65	84.25
CDX75532	Canola	cytosol	78.61	84.22
CDY24823	Canola	cytosol	78.2	84.06
KRH15702	Soybean	mitochondrion	16.95	84.0
PGSC0003DMT400022547	Potato	mitochondrion, plastid	83.15	84.0
Solyc12g005860.1.1	Tomato	extracellular, plastid	82.64	83.49
VIT_12s0059g02150.t01	Wine grape	plastid	83.05	83.38
Solyc07g052350.2.1	Tomato	plastid	83.65	83.32
PGSC0003DMT400074489	Potato	cytosol, extracellular	83.55	83.05
CDY66424	Canola	mitochondrion	78.71	78.39
CDY14291	Canola	mitochondrion, plastid	78.61	78.29
CDX91508	Canola	cytosol	6.46	78.05
CDY44621	Canola	cytosol	7.27	72.73
CDY19879	Canola	mitochondrion	3.63	41.86
CDY43713	Canola	plastid	10.9	21.43
CDY56070	Canola	plastid	10.9	21.39
CDY01130	Canola	plastid	10.9	21.26
CDY47367	Canola	plastid	10.8	21.02
CDX87247	Canola	cytosol	2.32	16.2

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	MapMan:2.3.2
Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	GO:A0A078EB05	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3
InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS	InterPro:Aconitase_4Fe-4S_dom
EnsemblPlants:CDX97969	ProteinID:CDX97969	ProteinID:CDX97969.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003994
GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00105322001	InterPro:IPR015928	InterPro:IPR015931	PFAM:PF00330
PFAM:PF00694	PRINTS:PR00415	ScanProsite:PS00450	ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF50
SUPFAM:SSF52016	SUPFAM:SSF53732	TIGRFAMs:TIGR01341	UniPathway:UPA00048	UniParc:UPI0004EEBD39	SEG:seg

Description

BnaA06g07200D

Coordinates

chrLK031902:+:287560..292595

Molecular Weight (calculated)

108059.0 Da

IEP (calculated)

6.921

GRAVY (calculated)

-0.211

Length

991 amino acids

Sequence
(BLAST)

001: MYKTTSSSLL RAASSRSPLL SSRSSLTQSS SSASPSPPSS LLGRRSFGTS SPAFRSLPRW SHCLHSRPSP FRLSSQIRAV SPGLDRLERN FSSMASEHPF
101: KGIFTTLPKP GGGEFGKFYS LPALNDPRID KLPYSIRILL ESAIRNCDNF QVTKEDVEKI IDWEKTAPKQ VEIPFKPARV LLQDFTGVPA VVDLACMRDA
201: MNKLGSDSNK INPLVPVDLV IDHSVQVDVA RSENAVQANM ELEFQRNKER FAFLKWGSTA FQNMLVVPPG SGIVHQVNLE YLGRVVFNTQ GVLYPDSVVG
301: TDSHTTMIDG LGVAGWGVGG IEAEATMLGQ PMSMVLPGVV GFKLSGKMRN GVTATDLVLT VTQILRKHGV VGKFVEFYGD GMSGLSLADR ATIANMSPEY
401: GATMGFFPVD HVTLQYLKLT GRSDETVAMI EAYLRANNMF VDYNEPQQDR AYSSYLELNL DNVEPCISGP KRPHDRVPLK EMKADWNSCL DSKVGFKGFA
501: IPKEAQEKVA NFSFNGKPAE ITHGSVVIAA ITSCTNTSNP SVMLGAGLVA KKACDLGLQV KPWIKTSLAP GSGVVTKYLL KSGLQEYLNQ QGFNIVGYGC
601: TTCIGNSGEI NESVGAAITE NDIVAAAVLS GNRNFEGRVH PLTRANYLAS PPLVVAYALA GTVNIDFETE PIGTGKNGKD VFLRDIWPTT EEIAEVVQSS
701: VLPDMFRATY ESITKGNPMW NELSVPENTL YSWDPKSTYI HEPPYFKDMT MEPPGPHSVN DAYCLLNFGD SITTDHISPA GNIQKDSPAA KYLMERGVDR
801: KDFNSYGSRR GNDEIMARGT FANIRIVNKL MNGEVGPKTV HIPSGEKLSV FDAAMRYKSS GEDTIILAGA EYGSGSSRDW AAKGPMLQGV KAVIAKSFER
901: IHRSNLVGMG IIPLCFKSGE DADTLGLTGH ERYTIHLPTD ISEIRPGQDV TVTTDNGKSF TCTVRFDTEV ELAYFNHGGI LPYVIRNLSK Q

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.