Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44621 | Canola | cytosol | 91.46 | 75.76 |
| Bra010508.1-P | Field mustard | cytosol | 91.46 | 8.35 |
| AT4G35830.1 | Thale cress | cytosol | 91.46 | 8.35 |
| CDX69174 | Canola | cytosol | 90.24 | 8.21 |
| CDY41626 | Canola | cytosol | 90.24 | 8.18 |
| CDY24823 | Canola | cytosol | 90.24 | 8.03 |
| CDX75532 | Canola | cytosol | 89.02 | 7.89 |
| KRH28848 | Soybean | cytosol, nucleus | 81.71 | 7.44 |
| KRH76600 | Soybean | endoplasmic reticulum | 80.49 | 7.33 |
| VIT_00s0264g00030.t01 | Wine grape | mitochondrion | 81.71 | 7.3 |
| HORVU4Hr1G080640.1 | Barley | mitochondrion | 76.83 | 6.8 |
| GSMUA_Achr11P... | Banana | plastid | 81.71 | 6.8 |
| GSMUA_Achr11P... | Banana | plastid | 80.49 | 6.59 |
| CDY18054 | Canola | plastid | 78.05 | 6.49 |
| CDY56501 | Canola | plastid | 76.83 | 6.47 |
| CDX97969 | Canola | plastid | 78.05 | 6.46 |
| CDX93088 | Canola | plastid | 78.05 | 6.44 |
| CDY50945 | Canola | plastid | 78.05 | 6.43 |
| Os03t0136900-01 | Rice | mitochondrion | 76.83 | 6.39 |
| TraesCS5A01G505000.2 | Wheat | golgi | 76.83 | 6.33 |
| CDY66424 | Canola | mitochondrion | 75.61 | 6.23 |
| CDY14291 | Canola | mitochondrion, plastid | 75.61 | 6.23 |
| Zm00001d048358_P002 | Maize | plastid | 74.39 | 6.17 |
| Zm00001d027558_P003 | Maize | plastid | 75.61 | 6.05 |
| EER92899 | Sorghum | plastid | 70.73 | 5.85 |
| CDX87247 | Canola | cytosol | 3.66 | 2.11 |
| CDY43713 | Canola | plastid | 10.98 | 1.79 |
| CDY56070 | Canola | plastid | 10.98 | 1.78 |
| CDY01130 | Canola | plastid | 10.98 | 1.77 |
| CDY47367 | Canola | plastid | 10.98 | 1.77 |
| CDY19879 | Canola | mitochondrion | 1.22 | 1.16 |
| TraesCS4B01G335100.1 | Wheat | endoplasmic reticulum | 9.76 | 1.0 |
Protein Annotations
| EnsemblPlants:CDX91508 | EnsemblPlantsGene:GSBRNA2T00152877001 | Gene3D:3.30.499.20 | GO:A0A078DWB7 | GO:GO:0008150 | GO:GO:0008152 |
| InterPro:Aconitase/IRP2 | InterPro:Aconitase_4Fe-4S_dom | KEGG:00020+4.2.1.3 | KEGG:00290+4.2.1.33 | KEGG:00630+4.2.1.3 | KEGG:00720+4.2.1.3 |
| PANTHER:PTHR11670 | PANTHER:PTHR11670:SF52 | ProteinID:CDX91508 | ProteinID:CDX91508.1 | SUPFAM:SSF53732 | UniParc:UPI0004EDF6BB |
| UniPathway:UPA00048 | MapMan:35.1 | : | : | : | : |
Description
BnaC04g06420D
Coordinates
chrLK031867:-:1540618..1541151
Molecular Weight (calculated)
9540.5 Da
IEP (calculated)
9.505
GRAVY (calculated)
-0.517
Length
82 amino acids
Sequence
(BLAST)
(BLAST)
1: MLEKPDGGKF GNYYSLRALN DSRIDKLPYS IRILLESAIR NCHEFQVKSK DVEKILDWEN TSPKQVEIPF KPARVLLRVY TG
001: MASENPFRSI LKALEKPDGG EFGNYYSLPA LNDPRIDKLP YSIRILLESA IRNCDEFQVK SKDVEKILDW ENTSPKQVEI PFKPARVLLQ DFTGVPAVVD
101: LACMRDAMNN LGGDSNKINP LVPVDLVIDH SVQVDVARSE NAVQANMELE FQRNKERFAF LKWGSNAFHN MLVVPPGSGI VHQVNLEYLA RVVFNTNGLL
201: YPDSVVGTDS HTTMIDGLGV AGWGVGGIEA EATMLGQPMS MVLPGVVGFK LTGKLRDGMT ATDLVLTVTQ MLRKHGVVGK FVEFHGEGMR ELSLADRATI
301: ANMSPEYGAT MGFFPVDHVT LQYLRLTGRS DDTVSMIEAY LRANKMFVDY SEPESKTVYS SCLELNLEDV EPCVSGPKRP HDRVPLKEMK ADWHSCLDNR
401: VGFKGFAVPK EAQSKAVEFN FNGTTAQLRH GDVVIAAITS CTNTSNPSVM LGAALVAKKA CDLGLEVKPW IKTSLAPGSG VVTKYLAKSG LQKYLNQLGF
501: SIVGYGCTTC IGNSGDIHEA VASAIVDNDL VASAVLSGNR NFEGRVHPLT RANYLASPPL VVAYALAGTV DIDFETQPIG TGKDGKQIFF RDIWPSNKEV
601: AEVVQSSVLP DMFKATYEAI TKGNSMWNQL SVASGTLYEW DPKSTYIHEP PYFKGMTMSP PGPHGVKDAY CLLNFGDSIT TDHISPAGSI HKDSPAAKYL
701: MERGVDRRDF NSYGSRRGND EIMARGTFAN IRIVNKHLKG EVGPKTVHIP TGEKLSVFDA AMKYRNEGRD TIILAGAEYG SGSSRDWAAK GPMLLGVKAV
801: ISKSFERIHR SNLVGMGIIP LCFKAGEDAE TLGLTGQELY TIELPNNVSE IKPGQDVTVV TNNGKSFTCT LRFDTEVELA YFDHGGILQY VIRNLIKQ
101: LACMRDAMNN LGGDSNKINP LVPVDLVIDH SVQVDVARSE NAVQANMELE FQRNKERFAF LKWGSNAFHN MLVVPPGSGI VHQVNLEYLA RVVFNTNGLL
201: YPDSVVGTDS HTTMIDGLGV AGWGVGGIEA EATMLGQPMS MVLPGVVGFK LTGKLRDGMT ATDLVLTVTQ MLRKHGVVGK FVEFHGEGMR ELSLADRATI
301: ANMSPEYGAT MGFFPVDHVT LQYLRLTGRS DDTVSMIEAY LRANKMFVDY SEPESKTVYS SCLELNLEDV EPCVSGPKRP HDRVPLKEMK ADWHSCLDNR
401: VGFKGFAVPK EAQSKAVEFN FNGTTAQLRH GDVVIAAITS CTNTSNPSVM LGAALVAKKA CDLGLEVKPW IKTSLAPGSG VVTKYLAKSG LQKYLNQLGF
501: SIVGYGCTTC IGNSGDIHEA VASAIVDNDL VASAVLSGNR NFEGRVHPLT RANYLASPPL VVAYALAGTV DIDFETQPIG TGKDGKQIFF RDIWPSNKEV
601: AEVVQSSVLP DMFKATYEAI TKGNSMWNQL SVASGTLYEW DPKSTYIHEP PYFKGMTMSP PGPHGVKDAY CLLNFGDSIT TDHISPAGSI HKDSPAAKYL
701: MERGVDRRDF NSYGSRRGND EIMARGTFAN IRIVNKHLKG EVGPKTVHIP TGEKLSVFDA AMKYRNEGRD TIILAGAEYG SGSSRDWAAK GPMLLGVKAV
801: ISKSFERIHR SNLVGMGIIP LCFKAGEDAE TLGLTGQELY TIELPNNVSE IKPGQDVTVV TNNGKSFTCT LRFDTEVELA YFDHGGILQY VIRNLIKQ
Arabidopsis Description
ACO1Aconitate hydratase [Source:UniProtKB/TrEMBL;Acc:A0A178V2T4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.