Factsheet for TraesCS4B01G335100.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
golgi 4
plasma membrane 5
endoplasmic reticulum 6
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G080640.1	Barley	mitochondrion	97.25	83.91
TraesCS5A01G505000.2	Wheat	golgi	98.0	78.69
Bra011642.1-P	Field mustard	cytosol	83.23	74.05
Bra010508.1-P	Field mustard	cytosol	83.1	73.94
Os03t0136900-01	Rice	mitochondrion	91.11	73.83
CDX69174	Canola	cytosol	83.23	73.81
AT4G35830.1	Thale cress	cytosol	82.73	73.61
KRH28848	Soybean	cytosol, nucleus	82.85	73.47
EER92899	Sorghum	plastid	91.11	73.46
CDY41626	Canola	cytosol	82.98	73.26
KRH76600	Soybean	endoplasmic reticulum	82.6	73.25
VIT_00s0264g00030.t01	Wine grape	mitochondrion	83.85	72.98
Zm00001d048358_P002	Maize	plastid	90.24	72.9
CDY24823	Canola	cytosol	83.23	72.13
CDX75532	Canola	cytosol	83.35	72.0
TraesCS3B01G213800.1	Wheat	cytosol	58.95	71.8
Zm00001d027558_P003	Maize	plastid	90.61	70.7
TraesCS6B01G440200.1	Wheat	plastid	85.23	69.7
GSMUA_Achr11P...	Banana	plastid	85.98	69.68
GSMUA_Achr11P...	Banana	plastid	79.72	63.64
TraesCS3B01G213900.1	Wheat	plastid	72.22	57.47
TraesCS2B01G181900.1	Wheat	plastid	12.77	20.36
TraesCS6B01G108100.2	Wheat	plastid	12.64	19.96
CDX91508	Canola	cytosol	1.0	9.76
CDY44621	Canola	cytosol	1.0	8.08

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	MapMan:2.3.2
Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba
InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS	InterPro:Aconitase_4Fe-4S_dom	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0003994	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005773	GO:GO:0005829	GO:GO:0005886	GO:GO:0006101	GO:GO:0006102	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0009605	GO:GO:0009628	GO:GO:0009651
GO:GO:0009987	GO:GO:0009991	GO:GO:0016020	GO:GO:0048027	GO:GO:0048046	GO:GO:1990641
InterPro:IPR015928	InterPro:IPR015931	PFAM:PF00330	PFAM:PF00694	PRINTS:PR00415	ScanProsite:PS00450
ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF49	SUPFAM:SSF52016	SUPFAM:SSF53732	SignalP:SignalP-noTM
TIGRFAMs:TIGR01341	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G335100	EnsemblPlants:TraesCS4B01G335100.1	TIGR:cd01580	TIGR:cd01586
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:626007336..626012023

Molecular Weight (calculated)

86700.1 Da

IEP (calculated)

6.359

GRAVY (calculated)

-0.073

Length

799 amino acids

Sequence
(BLAST)

001: MTVLCLCLCA LAYIAACIFF QVPVDLVVDH SVQVDVARSE NAVQANMELE FSRNKERFGF LKWGSTAFNN MLVVPPGSGI VHQVNLEYLA RVVFNNGGIL
101: YPDSVVGTDS HTTMIDGLGV AGWGVGGIEA EATMLGQPMS MVLPAVVGFK LSGKLRNGVT ATDLVLTVTQ MLRKHGVVGK FVEFYGGGMG ELSLADRATI
201: ANMAPEYGAT MGFFPVDAKT LDYLKLTGRS DETVAMIETY LRANNMFVDY KQVQAERVYS SYLELDLDEV EPCLSGPKRP HDRVTLKNMQ SDWLSCLDNK
301: VGFKGFAVPK ESQGKVAEFS FRGTPAKIKH GDVVIAAITS CTNTSNPNVM LGAALVAKKA CDLGLEVKPW IKTSLAPGSG VVKKYLDKSG LQKYLNQLGF
401: NIVGYGCTTC IGNSGDLDES VAAAITDNDV VAAAVLSGNR NFEGRVHALT RANYLASPPL VVAYALAGTV NIDFEKEPVG ISKDGKEVFF RDIWPTTDEI
501: AEVVKASVLP DMFKGTYEAI TKGNPMWNEL PVSASTLYPW DPKSTYIHEP PYFKDMTMTP PGARPVKDAY CLLNFGDSIT TDHISPAGSI HPDSPAAKYL
601: KERNVERKDF NSYGSRRGND EIMARGTFAN IRIVNKFLKG EVGPKTVHVP SGEKLAVFDA AMKYKNEGHD TIILAGAEYG SGSSRDWAAK GPMLQGVKAV
701: IAKSFERIHR SNLAGMGIVP LCFKAGEDAD SLGLTGHERY TIQLPTDVNE IKPGQDVTVT TDNGKSFTCT LRFDTEVELA YYTHGGILPY VIRKIAAEQ

Best Arabidopsis Sequence Match ( AT5G54950.1 )
(BLAST)

1: MAFKSGEDAE TLGLTGHELY TIHLPSNINE IKPGQDITVT TDTAKSFVCT LRLDTEIWVL CFIKKQVNSV SDNV

Arabidopsis Description

Aconitase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFT5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.