Factsheet for Zm00001d027558_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92899	Sorghum	plastid	93.55	96.67
Zm00001d048358_P002	Maize	plastid	93.36	96.66
Os03t0136900-01	Rice	mitochondrion	89.45	92.9
HORVU4Hr1G080640.1	Barley	mitochondrion	83.3	92.12
TraesCS4B01G335100.1	Wheat	endoplasmic reticulum	70.7	90.61
TraesCS5A01G505000.2	Wheat	golgi	86.52	89.05
Bra011642.1-P	Field mustard	cytosol	73.34	83.63
CDX69174	Canola	cytosol	73.44	83.46
VIT_00s0264g00030.t01	Wine grape	mitochondrion	74.8	83.44
GSMUA_Achr11P...	Banana	plastid	80.27	83.37
Bra010508.1-P	Field mustard	cytosol	73.05	83.3
AT4G35830.1	Thale cress	cytosol	73.05	83.3
KRH28848	Soybean	cytosol, nucleus	73.24	83.24
KRH76600	Soybean	endoplasmic reticulum	73.05	83.02
CDY41626	Canola	cytosol	72.75	82.32
CDX75532	Canola	cytosol	73.93	81.84
CDY24823	Canola	cytosol	73.05	81.13
Zm00001d049409_P001	Maize	plasma membrane	76.37	79.23
GSMUA_Achr11P...	Banana	plastid	75.88	77.62
CDX91508	Canola	cytosol	6.05	75.61
Zm00001d024952_P005	Maize	cytosol	63.28	72.65
Zm00001d006476_P004	Maize	mitochondrion	68.26	70.04
CDY44621	Canola	cytosol	6.54	67.68
Zm00001d004564_P004	Maize	plastid	65.92	67.3
Zm00001d020428_P001	Maize	cytosol	17.19	65.43
Zm00001d032214_P001	Maize	mitochondrion, plastid	19.92	57.14
Zm00001d035277_P001	Maize	cytosol, mitochondrion, plastid	23.24	45.33
Zm00001d015497_P001	Maize	cytosol	12.21	44.64
Zm00001d040769_P001	Maize	mitochondrion	12.21	44.64
Zm00001d015088_P002	Maize	plastid	10.64	21.58
Zm00001d053960_P003	Maize	plastid	10.35	20.99
Zm00001d053941_P001	Maize	cytosol	6.45	18.64
Zm00001d053950_P001	Maize	cytosol	3.61	15.74

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	EntrezGene:100304277
MapMan:2.3.2	Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	UniProt:A0A1D6JN03
InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS
InterPro:Aconitase_4Fe-4S_dom	ncoils:Coil	GO:GO:0008150	GO:GO:0008152	InterPro:IPR015928	InterPro:IPR015931
ProteinID:ONL93421.1	ProteinID:ONL93424.1	ProteinID:ONL93426.1	ProteinID:ONL93429.1	ProteinID:ONL93434.1	PFAM:PF00330
PFAM:PF00694	PRINTS:PR00415	ScanProsite:PS00450	ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF49
SUPFAM:SSF52016	SUPFAM:SSF53732	TIGRFAMs:TIGR01341	UniParc:UPI0008455C29	EnsemblPlantsGene:Zm00001d027558	EnsemblPlants:Zm00001d027558_P003
EnsemblPlants:Zm00001d027558_T003	SEG:seg	:	:	:	:

Description

Aconitate hydratase 1

Coordinates

chr1:-:8152458..8164250

Molecular Weight (calculated)

110662.0 Da

IEP (calculated)

7.627

GRAVY (calculated)

-0.167

Length

1024 amino acids

Sequence
(BLAST)

0001: MPPLTSSLLS RSTTGGSSTR AAAAVAAISR PAAPSSSSPP ARSTPRPRSS PASPFASGLA SRLFGGHRAV ARSASSAAAV FERRFASAAT RNSYDEILTG
0101: LAKPGGGEEF GKYYSLPALS DPRIDRLPYS IRILLESAIR NCDDFQVTGK DVEKILDWEK SAPKQVEIPF KPARVLLQDF TGVPAVVDLA CMRDAMSKLG
0201: SDPNKINPLV PVDLVIDHSV QVDVARSANA AQANMELEFH RNKERFGFLK WGSSAFRNML VVPPGSGIVH QVNLEYLARV VFNNGGILYP DSVVGTDSHT
0301: TMVDGLGVAG WGVGGIEAEA AMLGQPMSMV LPGVVGFKLS GKLRNGVTAT DLVLTVTQML RKHGVVGKFV EFYGQGMSEL SLADRATIAN MSPEYGATMG
0401: FFPVDGKTLD YLKLTGRSDD TVAMVESYLR ANKMFVDHSQ VDAERVYSSY LELNLEEVEP CLSGPKRPHD RVTLKNMKSD WLSCLDSDVG FKGFAVPKES
0501: QGKVAEFSFH GTPAKIKHGD VVIAAITSCT NTSNPNVMLG AALVAKKACE LGLEVKPWIK TSLAPGSGVV KKYLDKSGLQ KYLDQLGFHI VGYGCTTCIG
0601: NSGELDESVS AAITENDIVA AAVLSGNRNF EGRVHPLTRA NYLASPPLVV AYALAGTLTP SISSSLYSID PKYLKIGTNI LLHSSVVSVY QSLKLVNIDF
0701: EKEPIGISKD GKEVYFRDVW PSTEEIAEVV KSSVLPDMFK STYESITKGN PMWNELPVST STLYPWDPSS TYIHEPPYFK DMKMSPPGPR PVKDAYCLLN
0801: FGDSITTDHI SPAGNIHPDS PAAKYLKERG VERKDFNSYG SRRGNDEIMA RGTFANIRLV NKFLKGEVGP KTIHVPSGEK LAVFDAAMKY KNEGHDTIIL
0901: AGAEYGSGSS RDWAAKGPML QGVKAVIAKS FERIHRSNLA GMGIIPLCYK AGEDADTLGL TGHERYTVHL PTNVSEIKPG QDVTVTTDNG KSFTCTLRFD
1001: TEVELAYYDH GGILPYVARK IAEQ

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.