Factsheet for Zm00001d049409_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

plasma membrane: 18521681
extracellular: 20408568
plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 18521681 doi

P Carletti, A Masi, B Spolaore, P Polverino De Laureto, M De Zorzi, L Turetta, M Ferretti, S Nardi

Department of Agricultural Biotechnology, University of Padua, Agripolis, Strada Romea, 16-35020 Legnaro, Padova, Italy.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14669	Sorghum	plastid	97.37	96.49
TraesCS6D01G384200.1	Wheat	plastid	85.82	86.87
TraesCS6A01G400000.1	Wheat	golgi	85.61	86.58
TraesCS6B01G440200.1	Wheat	plastid	85.51	86.39
HORVU6Hr1G091950.9	Barley	cytosol	77.71	83.64
GSMUA_Achr5P00710_001	Banana	plastid	83.28	82.78
GSMUA_Achr9P30280_001	Banana	plastid	83.08	81.75
Zm00001d048358_P002	Maize	plastid	78.93	78.77
Zm00001d024952_P005	Maize	cytosol	69.71	77.13
CDY66424	Canola	mitochondrion	77.41	76.78
CDY14291	Canola	mitochondrion, plastid	77.31	76.68
Bra010419.1-P	Field mustard	mitochondrion, plastid	77.1	76.48
Zm00001d027558_P003	Maize	plastid	79.23	76.37
AT4G26970.1	Thale cress	mitochondrion	76.6	75.98
Zm00001d006476_P004	Maize	mitochondrion	73.45	72.65
Zm00001d020428_P001	Maize	cytosol	19.55	71.75
Zm00001d004564_P004	Maize	plastid	72.14	70.99
Zm00001d032214_P001	Maize	mitochondrion, plastid	22.59	62.47
Zm00001d035277_P001	Maize	cytosol, mitochondrion, plastid	25.63	48.19
Zm00001d015497_P001	Maize	cytosol	13.27	46.79
Zm00001d040769_P001	Maize	mitochondrion	13.27	46.79
CDY19879	Canola	mitochondrion	3.34	38.37
Zm00001d015088_P002	Maize	plastid	11.65	22.77
Zm00001d053960_P003	Maize	plastid	11.55	22.57
Zm00001d053941_P001	Maize	cytosol	6.99	19.49
Zm00001d053950_P001	Maize	cytosol	3.85	16.17

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	EntrezGene:100216599
MapMan:2.3.2	Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	UniProt:A0A1D6PUK8
ProteinID:AQK50307.1	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl
InterPro:Aconitase_4Fe-4S_BS	InterPro:Aconitase_4Fe-4S_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0003994	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016829	GO:GO:0051536	GO:GO:0051539	InterPro:IPR015928
InterPro:IPR015931	PFAM:PF00330	PFAM:PF00694	PRINTS:PR00415	ScanProsite:PS00450	ScanProsite:PS01244
PANTHER:PTHR11670	PANTHER:PTHR11670:SF50	SUPFAM:SSF52016	SUPFAM:SSF53732	TIGRFAMs:TIGR01341	UniParc:UPI0004DE7C28
EnsemblPlantsGene:Zm00001d049409	EnsemblPlants:Zm00001d049409_P001	EnsemblPlants:Zm00001d049409_T001	SEG:seg	:	:

Description

aconitase1 aconitase1

Coordinates

chr4:+:29640856..29648406

Molecular Weight (calculated)

107115.0 Da

IEP (calculated)

7.083

GRAVY (calculated)

-0.131

Length

987 amino acids

Sequence
(BLAST)

001: MYKAANARLL LRSLSPNSAA LASVNPGRAA SSARLALSLP CGAWVGRSGL VRRAAAFSGT RPRFAGARAQ IGAAVPAVEQ FQRRMATQAT VHAFKDILTS
101: LPKPGGGEYG KFYSLPALND PRIDKLPYSV RILLESAIRN CDNFQVTKND VEKIIDWENT SPKLAEIPFK PARVLLQDFT GVPAVVDLAA MRDAMAKLGS
201: DANKINPLVP VDLVIDHSVQ VDVARSQNAV QANMELEFSR NKERFGFLKW GSSAFQNMLV VPPGSGIVHQ VNLEYLGRVV FNTDGILYPD SVVGTDSHTT
301: MIDGLGVAGW GVGGIEAEAT MLGQPMSMVL PGVVGFKLTG KLRSGVTATD LVLTVTQMLR KHGVVGKFVE FYGEGMGKLS LADRATIANM SPEYGATMGF
401: FPVDHVTLDY LKLTGRSDET VSMIEAYLRA NKMFVDYNEP PTERIYSSYL ELNLDEVEPS MSGPKRPHDR VPLKEMKSDW HACLDNKVGF KGFAVPKEQQ
501: DKVVKFDFHG QPAEMKHGSV VIAAITSCTN TSNPSVMLGA GLVAKKACEL GLEVKPWVKT SLAPGSGVVT KYLLQSGLQE YLNQQGFHIV GYGCTTCIGN
601: SGDLDESVST AITENDVVAA AVLSGNRNFE GRVHPLTRAN YLASPPLVVA YALAGTVDID FEKEPIGFGK DGKEVYFRDI WPSTEEIAQV VQSSVLPDMF
701: KGTYEAITKG NPMWNQLTVP EASLYSWDSK STYIHEPPYF KDMTMSPPGP STVKDAYCLL NFGDSITTDH ISPAGSIHKD SPAAKYLMER GVDRKDFNSY
801: GSRRGNDEVM ARGTFANIRI VNKFLNGEVG PKTIHVPTGE KLSVFDAAMR YKSEGHATII LAGAEYGSGS SRDWAAKGPM LLGVKAVIAK SFERIHRSNL
901: VGMGIIPLCF KAGEDADSLG LTGHERYSID LPTNLSEIRP GQDVTVTTDN GKSFTCIVRF DTEVELAYFN HGGILPYVIR NLAAAHN

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.