CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66424	Canola	mitochondrion	99.6	99.6
Bra010419.1-P	Field mustard	mitochondrion, plastid	99.2	99.2
AT4G26970.1	Thale cress	mitochondrion	93.27	93.27
CDX69174	Canola	cytosol	72.56	80.13
CDY41626	Canola	cytosol	72.16	79.34
CDY18054	Canola	plastid	77.99	78.7
CDX97969	Canola	plastid	78.29	78.61
CDX93088	Canola	plastid	78.39	78.47
CDY50945	Canola	plastid	78.29	78.29
CDY24823	Canola	cytosol	72.46	78.2
CDX75532	Canola	cytosol	72.66	78.16
TraesCS6D01G384200.1	Wheat	plastid	76.18	77.74
VIT_19s0090g00460.t01	Wine grape	plastid	78.69	77.6
TraesCS6B01G440200.1	Wheat	plastid	76.18	77.58
TraesCS6A01G400000.1	Wheat	golgi	75.88	77.36
Zm00001d049409_P001	Maize	plasma membrane	76.68	77.31
GSMUA_Achr5P00710_001	Banana	plastid	77.09	77.24
GSMUA_Achr9P30280_001	Banana	plastid	77.69	77.07
EES14669	Sorghum	plastid	76.98	76.91
PGSC0003DMT400057191	Potato	plastid	72.36	76.19
CDX91508	Canola	cytosol	6.23	75.61
TraesCS7D01G223000.1	Wheat	cytosol	56.08	75.2
CDY56501	Canola	plastid	72.96	74.61
HORVU7Hr1G045470.22	Barley	cytosol	60.3	74.17
HORVU6Hr1G091950.9	Barley	cytosol	68.14	73.94
TraesCS7A01G219100.1	Wheat	golgi, unclear	65.33	71.9
EER97286	Sorghum	mitochondrion	70.35	71.5
Zm00001d006476_P004	Maize	mitochondrion	68.44	68.24
CDY44621	Canola	cytosol	6.73	67.68
KRG89642	Soybean	cytosol	4.92	59.76
CDY19879	Canola	mitochondrion	3.82	44.19
CDY43713	Canola	plastid	11.26	22.22
CDY56070	Canola	plastid	11.26	22.18
CDY01130	Canola	plastid	11.16	21.85
CDY47367	Canola	plastid	11.16	21.81
CDX87247	Canola	cytosol	2.31	16.2

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	MapMan:2.3.2
Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	GO:A0A078FME9	UniProt:A0A078FME9
InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS
InterPro:Aconitase_4Fe-4S_dom	EnsemblPlants:CDY14291	ProteinID:CDY14291	ProteinID:CDY14291.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003994	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016829	GO:GO:0051536
GO:GO:0051539	EnsemblPlantsGene:GSBRNA2T00078888001	InterPro:IPR015928	InterPro:IPR015931	PFAM:PF00330	PFAM:PF00694
PRINTS:PR00415	ScanProsite:PS00450	ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF50	SUPFAM:SSF52016
SUPFAM:SSF53732	TIGRFAMs:TIGR01341	UniPathway:UPA00048	UniParc:UPI0004EEB040	SEG:seg	:

Description

BnaA08g14220DAconitate hydratase [Source:UniProtKB/TrEMBL;Acc:A0A078FME9]

Coordinates

chrLK032041:-:712638..718409

Molecular Weight (calculated)

108131.0 Da

IEP (calculated)

7.291

GRAVY (calculated)

-0.226

Length

995 amino acids

Sequence
(BLAST)

001: MYRRATAGVR SASTTLTRLS SSSLASAPAA SSSAPSASVL NQTSRSRSFS SALRSYRVCS ASTRWSHGGS WRSPASLRAQ ARVSAPVMER LERRYASMAS
101: EHAYKDLLTS LPKPGGGEYG KYYSLPALND PRIDKLPYSV RILLESAIRN CDNYQVTKDD VEKILDWENT STKQVEIAFK PARVILQDFT GVPALVDLAS
201: MRDAVKNLGS DPNKINPLVP VDLVVDHSVQ VDFARSEDAA QKNMELEFKR NKERFAFLKW GSTAFQNMLV VPPGSGIVHQ VNLEYLGRVV FNSGGFLYPD
301: SVVGTDSHTT MIDGLGVAGW GVGGIEAEAA MLGQPMSMVL PGVVGFKLDG KLKEGVTATD LVLTVTQILR KHGVVGKFVE FYGEGMSELS LADRATIANM
401: SPEYGATMGF FPVDHVTLEY LKLTGRSDET VSMIESYLRA NNMFVDYNEP QQERAYTSYL QLDLGHVEPC ISGPKRPHDR VPLKDMKADW HACLDNPVGF
501: KGFAVPKEKQ GEVVKFSYDG QPAEIKHGSV VIAAITSCTN TSNPSVMIGA ALVAKKAFDL GLKVKPWVKT SLAPGSRVVE KYLDRSGLRE DLNKQGFQIV
601: GYGCTTCIGN SGDLDKSVAA AIEGTDIIPA AVLSGNRNFE GRVHPQTRAN YLASPPLVVA YALAGTVDID FETEPLGTGK DGKNVFLRDI WPSNEEVAKV
701: VQYSVLPSMF KSSYETITEG NPLWNELSAP GSTLYSWDSN STYIHEPPYF KNMTADPPGP REVKDAYCLL NFGDSVTTDH ISPAGNIQKT SPAAKFLMDR
801: GVSQTDFNSY GSRRGNDEVM ARGTFANIRL VNKLLKGEVG PKTVHVPTGE KLSVFDAASR YMNAGQDTVI LAGAEYGSGS SRDWAAKGPL LLGVKAVISK
901: SFERIHRSNL AGMGIIPLCF KAGEDADTLG LTGHERYTVH LPTKVSDIKP GQDVTVTTDT GKSFVCTLRF DTEVELAYYD HGGILPYVIR SLSAK

Best Arabidopsis Sequence Match ( AT4G26970.1 )
(BLAST)

001: MYRRATSGVR SASARLSSSL SRIASSETAS VSAPSASSLR NQTNRSKSFS SALRSFRVCS ASTRWSHGGS WGSPASLRAQ ARNSTPVMEK FERKYATMAS
101: EHSYKDILTS LPKPGGGEYG KYYSLPALND PRIDKLPFSV RILLESAIRN CDNYQVTKDD VEKILDWENT STKQVEIAFK PARVILQDFT GVPVLVDLAS
201: MRDAVKNLGS DPSKINPLVP VDLVVDHSIQ VDFARSEDAA QKNLELEFKR NKERFTFLKW GSTAFQNMLV VPPGSGIVHQ VNLEYLGRVV FNSKGFLYPD
301: SVVGTDSHTT MIDGLGVAGW GVGGIEAEAA MLGQPMSMVL PGVVGFKLDG KLKEGVTATD LVLTVTQILR KHGVVGKFVE FYGEGMSELS LADRATIANM
401: SPEYGATMGF FPVDHVTLEY LKLTGRSDET VSMIESYLRA NNMFVDYNEP QQERAYTSYL QLDLGHVEPC ISGPKRPHDR VPLKDMKADW HACLDNPVGF
501: KGFAVPKEKQ EEVVKFSYNG QPAEIKHGSV VIAAITSCTN TSNPSVMIGA ALVAKKASDL GLKVKPWVKT SLAPGSRVVE KYLDRSGLRE SLTKQGFEIV
601: GYGCTTCIGN SGNLDPEVAS AIEGTDIIPA AVLSGNRNFE GRVHPQTRAN YLASPPLVVA YALAGTVDID FEKEPIGTRS DGKSVYLRDV WPSNEEVAQV
701: VQYSVLPSMF KSSYETITEG NPLWNELSAP SSTLYSWDPN STYIHEPPYF KNMTANPPGP REVKDAYCLL NFGDSVTTDH ISPAGNIQKT SPAAKFLMDR
801: GVISEDFNSY GSRRGNDEVM ARGTFANIRI VNKLLKGEVG PNTVHIPTGE KLSVFDAASK YKTAEQDTII LAGAEYGSGS SRDWAAKGPL LLGVKAVIAK
901: SFERIHRSNL AGMGIIPLCF KAGEDAETLG LTGHERYTVH LPTKVSDIRP GQDVTVTTDS GKSFVCTLRF DTEVELAYYD HGGILPYVIR SLSAK

Arabidopsis Description

ACO2Aconitate hydratase [Source:UniProtKB/TrEMBL;Acc:A0A178UVE5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.