CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93088	Canola	plastid	99.0	99.09
CDX97969	Canola	plastid	98.69	99.09
Bra019845.1-P	Field mustard	plastid	98.29	98.69
CDY18054	Canola	plastid	95.68	96.55
AT2G05710.1	Thale cress	plastid	93.87	94.34
CDY56501	Canola	plastid	87.94	89.93
CDX69174	Canola	cytosol	77.89	86.02
CDY41626	Canola	cytosol	77.49	85.19
KRH22567	Soybean	mitochondrion	83.82	84.76
KRH26786	Soybean	mitochondrion	83.72	84.65
KRH56130	Soybean	mitochondrion	83.12	84.47
KRH25376	Soybean	mitochondrion	83.32	84.25
CDX75532	Canola	cytosol	78.29	84.22
PGSC0003DMT400022547	Potato	mitochondrion, plastid	82.91	84.1
CDY24823	Canola	cytosol	77.89	84.06
KRH15702	Soybean	mitochondrion	16.88	84.0
VIT_12s0059g02150.t01	Wine grape	plastid	83.02	83.69
Solyc12g005860.1.1	Tomato	extracellular, plastid	82.41	83.59
Solyc07g052350.2.1	Tomato	plastid	83.52	83.52
PGSC0003DMT400074489	Potato	cytosol, extracellular	83.22	83.05
CDY66424	Canola	mitochondrion	78.29	78.29
CDY14291	Canola	mitochondrion, plastid	78.29	78.29
CDX91508	Canola	cytosol	6.43	78.05
CDY44621	Canola	cytosol	7.24	72.73
CDY19879	Canola	mitochondrion	3.62	41.86
CDY43713	Canola	plastid	10.85	21.43
CDY56070	Canola	plastid	10.85	21.39
CDY01130	Canola	plastid	10.85	21.26
CDY47367	Canola	plastid	10.75	21.02
CDX87247	Canola	cytosol	2.31	16.2

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	MapMan:2.3.2
Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	GO:A0A078IIQ3	UniProt:A0A078IIQ3
InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS
InterPro:Aconitase_4Fe-4S_dom	EnsemblPlants:CDY50945	ProteinID:CDY50945	ProteinID:CDY50945.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003994	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016829	GO:GO:0051536
GO:GO:0051539	EnsemblPlantsGene:GSBRNA2T00097804001	InterPro:IPR015928	InterPro:IPR015931	PFAM:PF00330	PFAM:PF00694
PRINTS:PR00415	ScanProsite:PS00450	ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF50	SUPFAM:SSF52016
SUPFAM:SSF53732	TIGRFAMs:TIGR01341	UniPathway:UPA00048	UniParc:UPI0004EDD5F1	SEG:seg	:

Description

BnaC03g74450DAconitate hydratase [Source:UniProtKB/TrEMBL;Acc:A0A078IIQ3]

Coordinates

chrLK032950:-:68327..73411

Molecular Weight (calculated)

108402.0 Da

IEP (calculated)

7.027

GRAVY (calculated)

-0.203

Length

995 amino acids

Sequence
(BLAST)

001: MYKTTSSSLL RAASSRSPLL SSRSSLSQSS SSSAASASPS PPSSLLGRRP FATSSPAFRS LPRWSHCLHS RLSPFRLSSQ IRAVSPGLDR LERKFSSMAS
101: EHPFKGIFTT LPKPGGGEFG KFYSLPALND PRIDKLPYSI RILLESAIRN CDNFQVTKED VEKIIDWEKT APKQVEIPFK PARVLLQDFT GVPAVVDLAC
201: MRDAMNKLGS DSNKINPLVP VDLVIDHSVQ VDVARSENAV QANMELEFQR NKERFAFLKW GSTAFQNMLV VPPGSGIVHQ VNLEYLGRVV FNTQGVLYPD
301: SVVGTDSHTT MIDGLGVAGW GVGGIEAEAT MLGQPMSMVL PGVVGFKLSG KMRNGVTATD LVLTVTQILR KHGVVGKFVE FYGDGMSGLS LADRATIANM
401: SPEYGATMGF FPVDHVTLQY LKLTGRSDET VAMIEAYLRA NNMFVDYDEP QQDRAYSSYL ELNLDNVEPC ISGPKRPHDR VPLKEMKADW NSCLDSKVGF
501: KGFAIPKEAQ EKVANFSFNG KPAEITHGSV VIAAITSCTN TSNPSVMLGA GLVAKKACDL GLQVKPWIKT SLAPGSGVVT KYLLKSGLQE YLNQQGFNIV
601: GYGCTTCIGN SGEINESVGA AITENDIVAA AVLSGNRNFE GRVHPLTRAN YLASPPLVVA YALAGTVNID FETEPIGTGK NGKDVFLRDI WPTTEEIAEV
701: VQSSVLPDMF RATYESITKG NPMWNELSVP ENTLYSWDPK STYIHEPPYF KDMTMDPPGP HSVKDAYCLL NFGDSITTDH ISPAGNIQKD SPAAKYLMER
801: GVDRKDFNSY GSRRGNDEIM ARGTFANIRI VNKLMNGEVG PKTVHIPSGE KLSVFDAAMR YKSSGEDTII LAGAEYGSGS SRDWAAKGPM LQGVKAVIAK
901: SFERIHRSNL VGMGIIPLCF KSGEDADTLG LTGHERYTIH LPTDISEIRP GQDVTVTTDN GKSFSCTVRF DTEVELAYFN HGGILPYVIR NLSKQ

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.