CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97969	Canola	plastid	99.2	99.5
Bra019845.1-P	Field mustard	plastid	98.79	99.09
CDY50945	Canola	plastid	99.09	99.0
CDY18054	Canola	plastid	96.18	96.96
AT2G05710.1	Thale cress	plastid	94.06	94.44
CDY56501	Canola	plastid	88.53	90.44
CDX69174	Canola	cytosol	78.07	86.13
CDY41626	Canola	cytosol	77.67	85.3
KRH22567	Soybean	mitochondrion	83.7	84.55
KRH26786	Soybean	mitochondrion	83.6	84.45
KRH56130	Soybean	mitochondrion	83.1	84.37
CDX75532	Canola	cytosol	78.47	84.32
KRH25376	Soybean	mitochondrion	83.4	84.25
CDY24823	Canola	cytosol	78.07	84.16
KRH15702	Soybean	mitochondrion	16.9	84.0
PGSC0003DMT400022547	Potato	mitochondrion, plastid	82.9	84.0
VIT_12s0059g02150.t01	Wine grape	plastid	83.0	83.59
Solyc12g005860.1.1	Tomato	extracellular, plastid	82.39	83.49
Solyc07g052350.2.1	Tomato	plastid	83.5	83.42
PGSC0003DMT400074489	Potato	cytosol, extracellular	83.4	83.15
CDY66424	Canola	mitochondrion	78.47	78.39
CDY14291	Canola	mitochondrion, plastid	78.47	78.39
CDX91508	Canola	cytosol	6.44	78.05
CDY44621	Canola	cytosol	7.24	72.73
CDY19879	Canola	mitochondrion	3.62	41.86
CDY43713	Canola	plastid	10.87	21.43
CDY56070	Canola	plastid	10.87	21.39
CDY01130	Canola	plastid	10.87	21.26
CDY47367	Canola	plastid	10.76	21.02
CDX87247	Canola	cytosol	2.31	16.2

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	MapMan:2.3.2
Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	GO:A0A078E0L0	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3
InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS	InterPro:Aconitase_4Fe-4S_dom
EnsemblPlants:CDX93088	ProteinID:CDX93088	ProteinID:CDX93088.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003994
GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00154999001	InterPro:IPR015928	InterPro:IPR015931	PFAM:PF00330
PFAM:PF00694	PRINTS:PR00415	ScanProsite:PS00450	ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF50
SUPFAM:SSF52016	SUPFAM:SSF53732	TIGRFAMs:TIGR01341	UniPathway:UPA00048	UniParc:UPI0004EE6AC3	SEG:seg

Description

BnaA03g38100D

Coordinates

chrLK031874:+:1126439..1131763

Molecular Weight (calculated)

108246.0 Da

IEP (calculated)

7.145

GRAVY (calculated)

-0.198

Length

994 amino acids

Sequence
(BLAST)

001: MYKTTSSSLL RAASSRSPLL SSRSSLTQSS SSAASASPSP PSSLLGRRSF ATSSPAFRSL PRWSHCLHSR PSLFRLSSQI RAVSPGLDRL ERNFSSMASE
101: HPFKGIFTTL PKPGGGEFGK FYSLPALNDP RIDKLPYSIR ILLESAIRNC DNFQVTKGDV EKIIDWEKTA PKQVEIPFKP ARVLLQDFTG VPAVVDLACM
201: RDAMNKLGSD SNKINPLVPV DLVIDHSVQV DVARSENAVQ ANMELEFQRN KERFAFLKWG STAFQNMLVV PPGSGIVHQV NLEYLGRVVF NTQGVLYPDS
301: VVGTDSHTTM IDGLGVAGWG VGGIEAEATM LGQPMSMVLP GVVGFKLSGK MRNGVTATDL VLTVTQILRK HGVVGKFVEF YGDGMSGLSL ADRATIANMS
401: PEYGATMGFF PVDHVTLQYL KLTGRSDETV AMIEAYLRAN NMFVDYNEPQ QDRAYSSYLE LNLDNVEPCI SGPKRPHDRV PLKEMKADWN SCLDSKVGFK
501: GFAIPKEAQE KVANFSFNGK PAEITHGSVV IAAITSCTNT SNPSVMLGAG LVAKKACDLG LQVKPWIKTS LAPGSGVVTK YLLKSGLQEY LNQQGFNIVG
601: YGCTTCIGNS GEINESVGAA ITENDIVAAA VLSGNRNFEG RVHPLTRANY LASPPLVVAY ALAGTVNIDF ETEPIGTGKN GKDVFLRDIW PTTEEIAEVV
701: QSSVLPDMFR ATYESITKGN PMWNELSVPE NTLYSWDPKS TYIHEPPYFK DMTMDPPGPH SVKDAYCLLN FGDSITTDHI SPAGNIQKDS PAAKYLMERG
801: VDRKDFNSYG SRRGNDEIMA RGTFANIRIV NKLMNGEVGP KTVHIPSGEK LSVFDAAMRY KSSGEDTIIL AGAEYGSGSS RDWAAKGPML QGVKAVIAKS
901: FERIHRSNLV GMGIIPLCFK SGEDADTLGL TGHERYTIHL PTDISEIRPG QDVTVTTDNG KSFTCTVRFD TEVELAYFNH GGILPYVIRN LSKQ

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.