CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01130	Canola	plastid	98.43	98.62
CDY56070	Canola	plastid	96.07	96.83
CDY43713	Canola	plastid	95.87	96.83
AT4G13430.1	Thale cress	plastid	93.91	93.91
PGSC0003DMT400035003	Potato	cytosol, plastid	82.71	82.71
Solyc03g005730.2.1	Tomato	plastid	82.32	82.32
VIT_05s0049g01980.t01	Wine grape	plastid	80.94	81.1
KRH17398	Soybean	nucleus	79.57	81.0
PGSC0003DMT400003947	Potato	cytosol	29.86	80.85
PGSC0003DMT400003942	Potato	cytosol	29.86	80.85
VIT_08s0056g01640.t01	Wine grape	plastid	81.53	80.58
GSMUA_Achr2P20910_001	Banana	plastid	68.76	80.28
Zm00001d015088_P002	Maize	plastid	77.6	78.22
EES06213	Sorghum	plastid	77.01	77.32
Zm00001d053960_P003	Maize	plastid	76.42	77.03
TraesCS6B01G108100.2	Wheat	plastid	75.83	76.28
Solyc09g090900.2.1	Tomato	plastid	75.64	76.24
KRG92248	Soybean	plastid	75.64	76.24
TraesCS2B01G181900.1	Wheat	plastid	74.46	75.65
TraesCS6D01G074300.1	Wheat	plastid	75.64	75.49
TraesCS6A01G080600.1	Wheat	plastid	75.44	75.29
Os02t0125100-01	Rice	plastid	75.64	74.9
HORVU6Hr1G013950.5	Barley	plastid	76.03	72.74
GSMUA_Achr10P...	Banana	cytosol	32.42	70.21
Zm00001d053941_P001	Maize	cytosol	44.79	64.41
CDX87247	Canola	cytosol	17.68	63.38
Zm00001d053950_P001	Maize	cytosol	23.18	50.21
KRH05916	Soybean	plastid	79.76	42.34
CDX69174	Canola	cytosol	20.83	11.76
CDY41626	Canola	cytosol	20.63	11.6
CDY24823	Canola	cytosol	20.63	11.39
CDX75532	Canola	cytosol	20.63	11.35
CDY18054	Canola	plastid	21.61	11.16
CDY14291	Canola	mitochondrion, plastid	21.81	11.16
CDY66424	Canola	mitochondrion	21.81	11.16
CDY56501	Canola	plastid	21.22	11.1
CDX91508	Canola	cytosol	1.77	10.98
CDX97969	Canola	plastid	21.02	10.8
CDX93088	Canola	plastid	21.02	10.76
CDY50945	Canola	plastid	21.02	10.75
CDY44621	Canola	cytosol	1.77	9.09
CDY19879	Canola	mitochondrion	0.39	2.33

Protein Annotations

KEGG:00290+4.2.1.33	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:4.1.3.2.5.2.1	MapMan:9.5.1.3.1	GO:A0A078IB26
UniProt:A0A078IB26	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase_4Fe-4S_dom	EnsemblPlants:CDY47367	ProteinID:CDY47367
ProteinID:CDY47367.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003861	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016836	GO:GO:0051539
EnsemblPlantsGene:GSBRNA2T00087256001	InterPro:Homoacnase/IPMdehydase_lsu	InterPro:IPMI_cat	InterPro:IPR015931	PFAM:PF00330	PRINTS:PR00415
PANTHER:PTHR43822	SUPFAM:SSF53732	TIGRFAMs:TIGR01343	UniPathway:UPA00048	UniParc:UPI0004EE1CE3	:

Description

BnaCnng15040DBnaCnng15040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IB26]

Coordinates

chrLK032712:+:152478..157047

Molecular Weight (calculated)

54987.7 Da

IEP (calculated)

7.409

GRAVY (calculated)

-0.170

Length

509 amino acids

Sequence
(BLAST)

001: MASSVISSSP FVCKSPAKDL GFSSFRKPSQ ISIHGCQKKS ISRKIVSVMA PQRSSSTSGS VKTGMTMTEK ILAKAAEKSQ VVPGDNIWVN VDVLMTHDVC
101: GPGAFGIFKR EFGENAKVWD SEKIVVIPDH YIFTTDKRAN RNVDIMREHC REQNIKYFYD ITDLGDFRAN PDYKGVCHVA LAQEGHCRPG EVLLGTDSHT
201: CTAGAFGQFA TGIGNTDAGF VLGTGKILLK VPPTMRFILD GEMPSYLQAK DLILQASIIG EISVAGATYK TMEFSGTTIE SLTMEERMTL CNMVVEAGGK
301: NGVIPPDATT FNYVENRTSV PFQPVYSDGN ASFVADYRFD VSKLEPVVAK PHSPDNRALA RECKDVKIDR VYIGSCTGGK TEDFMAAAKL FHAAGKQVKV
401: PTFLVPATQK VWMDVYALPV PGAGGKTCAQ IFEEAGCDTP TSPSCGACLG GPADTYARLN EPQVCVSTTN RNFPGRMGHK EGQIYLASPY TAAASALTGH
501: VTDPREFLQ

Best Arabidopsis Sequence Match ( AT4G13430.1 )
(BLAST)

001: MASVISSSPF LCKSSSKSDL GISSFPKSSQ ISIHRCQKKS ISRKIVSVMA PQKDRSPGTT GSVKTGMTMT EKILARASEK SLVVPGDNIW VNVDVLMTHD
101: VCGPGAFGIF KREFGEKAKV WDPEKIVVIP DHYIFTADKR ANRNVDIMRE HCREQNIKYF YDITDLGNFK ANPDYKGVCH VALAQEGHCR PGEVLLGTDS
201: HTCTAGAFGQ FATGIGNTDA GFVLGTGKIL LKVPPTMRFI LDGEMPSYLQ AKDLILQIIG EISVAGATYK TMEFSGTTIE SLSMEERMTL CNMVVEAGGK
301: NGVIPPDATT LNYVENRTSV PFEPVYSDGN ASFVADYRFD VSKLEPVVAK PHSPDNRALA RECKDVKIDR VYIGSCTGGK TEDFMAAAKL FHAAGRKVKV
401: PTFLVPATQK VWMDVYALPV PGAGGKTCAQ IFEEAGCDTP ASPSCGACLG GPADTYARLN EPQVCVSTTN RNFPGRMGHK EGQIYLASPY TAAASALTGR
501: VADPREFLQ

Arabidopsis Description

IIL13-isopropylmalate dehydratase large subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94AR8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.