CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17398	Soybean	nucleus	51.2	98.2
EES06213	Sorghum	plastid	44.53	84.22
GSMUA_Achr2P20910_001	Banana	plastid	38.27	84.17
Zm00001d015088_P002	Maize	plastid	43.8	83.17
Zm00001d053960_P003	Maize	plastid	43.07	81.78
Os02t0125100-01	Rice	plastid	43.69	81.52
TraesCS6B01G108100.2	Wheat	plastid	42.86	81.23
TraesCS6D01G074300.1	Wheat	plastid	43.17	81.18
TraesCS2B01G181900.1	Wheat	plastid	42.34	81.04
TraesCS6A01G080600.1	Wheat	plastid	43.07	80.98
Bra040341.1-P	Field mustard	plastid	42.54	80.95
CDY56070	Canola	plastid	42.54	80.79
CDY43713	Canola	plastid	42.44	80.75
CDY01130	Canola	plastid	42.44	80.12
CDY47367	Canola	plastid	42.34	79.76
Bra032708.1-P	Field mustard	plastid	42.34	79.61
AT4G13430.1	Thale cress	plastid	42.23	79.57
HORVU6Hr1G013950.5	Barley	plastid	42.75	77.07
GSMUA_Achr10P...	Banana	cytosol	18.77	76.6
KRG92248	Soybean	plastid	39.94	75.84
Zm00001d053941_P001	Maize	cytosol	26.28	71.19
CDX87247	Canola	cytosol	9.28	62.68
Zm00001d053950_P001	Maize	cytosol	13.35	54.47
KRH06959	Soybean	cytosol, mitochondrion, peroxisome, plastid	15.22	34.68
KRH54854	Soybean	cytosol	4.59	31.21
KRH74952	Soybean	cytosol	2.61	26.88
KRG94138	Soybean	cytosol	1.88	21.95
KRG89642	Soybean	cytosol	1.88	21.95
KRH66899	Soybean	cytosol	2.5	20.34
KRH15702	Soybean	mitochondrion	4.17	20.0
KRH26402	Soybean	cytosol, endoplasmic reticulum, plasma membrane	4.38	19.53
KRH30182	Soybean	cytosol	1.36	13.83
KRH76600	Soybean	endoplasmic reticulum	11.89	12.65
KRH28848	Soybean	cytosol, nucleus	11.89	12.65
KRH56130	Soybean	mitochondrion	12.2	11.95
KRH25376	Soybean	mitochondrion	12.1	11.79
KRH26786	Soybean	mitochondrion	11.78	11.48
KRH22567	Soybean	mitochondrion	11.78	11.48

Protein Annotations

KEGG:00290+4.2.1.33	Gene3D:3.30.499.10	Gene3D:3.30.499.20	Gene3D:3.60.10.10	MapMan:4.1.3.2.5.2.1	MapMan:9.5.1.3.1
EMBL:ACUP02010784	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase_4Fe-4S_dom	InterPro:Endo/exonu/phosph_ase_sf	EnsemblPlantsGene:GLYMA_17G256100
GO:GO:0003674	GO:GO:0003824	GO:GO:0003861	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0046983	InterPro:IPMI_cat	InterPro:IPR015931	InterPro:IPR036691	UniProt:K7MP05
EnsemblPlants:KRH05916	ProteinID:KRH05916	ProteinID:KRH05916.1	PFAM:PF00330	PRINTS:PR00415	PANTHER:PTHR43822
PANTHER:PTHR43822:SF2	SUPFAM:SSF53732	SUPFAM:SSF56219	UniParc:UPI000296FCE9	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:-:40998966..41010167

Molecular Weight (calculated)

108060.0 Da

IEP (calculated)

8.959

GRAVY (calculated)

-0.459

Length

959 amino acids

Sequence
(BLAST)

001: MASSLLSPSF TSFPRIKKDV SLSAFTSQRC FKALPRRIIR CAVAAPQRQP STTGSVRTAM TMTEKILARA SEKVQLTPGD NVWVNVDILM THDVCGPGSI
101: GIFKREFGDD AKVWDREKLV IIPDHYIFTS DERANRNVDI LRDFCHEQNI KYFYDIKDLS NFKVNPDYKG VCHVALAQEG HCRPGEVLLG TDSHTCTAGA
201: FGQFATGIGN TDAGFVLGTG KLLLKVPPTL RFVMDGEMPD YLLSKDLILQ IIGEITVAGA TYKSMEFVGT TVESLTMEER MTLCNMVVEA GGKNGVVPAD
301: STTFKYLEGK TSLPYEPVYS DDQARFLAEY RFDVSKLEPV VAKPHSPDNR ALARECKDVK IDRVYIGSCT GGKTEDFMAA AKVFLASGKQ VKVPTFLVPA
401: TQKVWMDLYS LPVPGSGGKT CSQIFEEAGC DTPASPSCGA CLGGPKDTYA RMNEPKARII VDKEWKKDVV DVRRVGDRII ALKLVVGQDT FNVISGYAPQ
501: VGLAEHFKVK FWEDLKGVLQ DIPQGEKVFL GGDLNGHVGS VARGFEGVHG GFGLGEMNGE GKSILEFSEA LDLSIANTWF KKREDHLITY KSGGTCSQID
601: FFLIRKSDRK YCLNCKVIPE ESLTTQHRVL VMDVRIRDRA KRRSPMVAPR IKWWHLKGEK QGIFQQKIWE GWCGQSQGSA NDLWNKMSQE IIKVAKETLG
701: ESRGFGPRGK ESWWWNESVQ SKVRVKKECF KEWSRCRNSE TWDKYKIARN ETKKAVSEAR AQAFDGLYQA LGTRDGERSI YRLAKGRERK TRDLDQVKCV
801: KDEEGKVLVH EKDIKERWKA YFHNLFNDGY GYDSSSLDTR EEDRNYKYYR RIQKQEVKEA LKRMSNGKAV GPDNIPIEVW KTLGDRGLEW LTKLFNEIMR
901: SKRMPEEWRR STLVCVSTTN RNFPGRMGHK EGQIYLASPY TAAASALTGY VTDPREFLQ

Best Arabidopsis Sequence Match ( AT4G13430.1 )
(BLAST)

001: MASVISSSPF LCKSSSKSDL GISSFPKSSQ ISIHRCQKKS ISRKIVSVMA PQKDRSPGTT GSVKTGMTMT EKILARASEK SLVVPGDNIW VNVDVLMTHD
101: VCGPGAFGIF KREFGEKAKV WDPEKIVVIP DHYIFTADKR ANRNVDIMRE HCREQNIKYF YDITDLGNFK ANPDYKGVCH VALAQEGHCR PGEVLLGTDS
201: HTCTAGAFGQ FATGIGNTDA GFVLGTGKIL LKVPPTMRFI LDGEMPSYLQ AKDLILQIIG EISVAGATYK TMEFSGTTIE SLSMEERMTL CNMVVEAGGK
301: NGVIPPDATT LNYVENRTSV PFEPVYSDGN ASFVADYRFD VSKLEPVVAK PHSPDNRALA RECKDVKIDR VYIGSCTGGK TEDFMAAAKL FHAAGRKVKV
401: PTFLVPATQK VWMDVYALPV PGAGGKTCAQ IFEEAGCDTP ASPSCGACLG GPADTYARLN EPQVCVSTTN RNFPGRMGHK EGQIYLASPY TAAASALTGR
501: VADPREFLQ

Arabidopsis Description

IIL13-isopropylmalate dehydratase large subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94AR8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.