Factsheet for Bra040341.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43713	Canola	plastid	99.8	99.8
CDY56070	Canola	plastid	99.6	99.41
Bra032708.1-P	Field mustard	plastid	96.63	95.49
AT4G13430.1	Thale cress	plastid	95.04	94.11
PGSC0003DMT400035003	Potato	cytosol, plastid	83.33	82.51
Solyc03g005730.2.1	Tomato	plastid	82.94	82.12
KRH17398	Soybean	nucleus	80.95	81.6
PGSC0003DMT400003947	Potato	cytosol	30.16	80.85
PGSC0003DMT400003942	Potato	cytosol	30.16	80.85
GSMUA_Achr2P20910_001	Banana	plastid	69.84	80.73
VIT_08s0056g01640.t01	Wine grape	plastid	82.34	80.58
VIT_05s0049g01980.t01	Wine grape	plastid	80.95	80.31
Zm00001d015088_P002	Maize	plastid	78.37	78.22
Zm00001d053960_P003	Maize	plastid	77.78	77.62
EES06213	Sorghum	plastid	77.98	77.51
TraesCS6B01G108100.2	Wheat	plastid	77.18	76.88
KRG92248	Soybean	plastid	76.98	76.83
Solyc09g090900.2.1	Tomato	plastid	76.39	76.24
TraesCS6D01G074300.1	Wheat	plastid	76.98	76.08
TraesCS6A01G080600.1	Wheat	plastid	76.79	75.88
TraesCS2B01G181900.1	Wheat	plastid	75.4	75.85
Os02t0125100-01	Rice	plastid	76.79	75.29
HORVU6Hr1G013950.5	Barley	plastid	77.18	73.12
GSMUA_Achr10P...	Banana	cytosol	33.13	71.06
Zm00001d053941_P001	Maize	cytosol	45.44	64.69
Zm00001d053950_P001	Maize	cytosol	23.41	50.21
KRH05916	Soybean	plastid	80.95	42.54
Bra011642.1-P	Field mustard	cytosol	21.23	11.92
Bra010508.1-P	Field mustard	cytosol	21.23	11.92
Bra010419.1-P	Field mustard	mitochondrion, plastid	22.22	11.26
Bra019845.1-P	Field mustard	plastid	21.43	10.9
Bra015165.1-P	Field mustard	plastid	18.25	9.06

Protein Annotations

KEGG:00290+4.2.1.33	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:4.1.3.2.5.2.1	MapMan:9.5.1.3.1	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3
InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase_4Fe-4S_dom	EnsemblPlantsGene:Bra040341	EnsemblPlants:Bra040341.1	EnsemblPlants:Bra040341.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0003861	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016836	GO:GO:0051539	InterPro:Homoacnase/IPMdehydase_lsu	InterPro:IPMI_cat
InterPro:IPR015931	UniProt:M4FGW3	PFAM:PF00330	PRINTS:PR00415	PANTHER:PTHR43822	SUPFAM:SSF53732
TIGRFAMs:TIGR01343	UniParc:UPI0002545654	:	:	:	:

Description

AT4G13430 (E=5e-284) IIL1 | IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1); 4 iron, 4 sulfur cluster binding / hydro-lyase/ lyase

Coordinates

chrA08:-:5949064..5952370

Molecular Weight (calculated)

54584.4 Da

IEP (calculated)

7.409

GRAVY (calculated)

-0.171

Length

504 amino acids

Sequence
(BLAST)

001: MASSVISSSP FLCKSAQKDL GFPKPSQISV HRCQKRAISR KIVSVMAPQR SSSATGSVKT GMTMTEKILA KAAEKSQVVP GDNIWVNVDV LMTHDVCGPG
101: AFGIFKREFG EKAKVWDPEK IVVIPDHYIF TADKRANRNV DIMREHCREQ NIKYFYDITD LGDFRANPDY KGVCHVALAQ EGHCRPGEVL LGTDSHTCTA
201: GAFGQFATGI GNTDAGFVLG TGKILLKVPP TMRFILDGEM PSYLQAKDLI LQIIGEISVA GATYKTMEFS GTTIESLTME ERMTLCNMVV EAGGKNGVIP
301: PDATTFNYVE NRTSVPFEPV YSDGNASFIA DYRFDVSKLE PVVAKPHSPD NRALARECKD VKIDRVYIGS CTGGKTEDFM AAAKLFHAAG KQVKVPTFLV
401: PATQKVWMDV YALPVPGAGG KTCAQIFEEA GCDTPTSPSC GACLGGPADT YARLNEPQVC VSTTNRNFPG RMGHKEGQIY LASPYTAAAS ALTGHVTDPR
501: EFLQ

Best Arabidopsis Sequence Match ( AT4G13430.1 )
(BLAST)

001: MASVISSSPF LCKSSSKSDL GISSFPKSSQ ISIHRCQKKS ISRKIVSVMA PQKDRSPGTT GSVKTGMTMT EKILARASEK SLVVPGDNIW VNVDVLMTHD
101: VCGPGAFGIF KREFGEKAKV WDPEKIVVIP DHYIFTADKR ANRNVDIMRE HCREQNIKYF YDITDLGNFK ANPDYKGVCH VALAQEGHCR PGEVLLGTDS
201: HTCTAGAFGQ FATGIGNTDA GFVLGTGKIL LKVPPTMRFI LDGEMPSYLQ AKDLILQIIG EISVAGATYK TMEFSGTTIE SLSMEERMTL CNMVVEAGGK
301: NGVIPPDATT LNYVENRTSV PFEPVYSDGN ASFVADYRFD VSKLEPVVAK PHSPDNRALA RECKDVKIDR VYIGSCTGGK TEDFMAAAKL FHAAGRKVKV
401: PTFLVPATQK VWMDVYALPV PGAGGKTCAQ IFEEAGCDTP ASPSCGACLG GPADTYARLN EPQVCVSTTN RNFPGRMGHK EGQIYLASPY TAAASALTGR
501: VADPREFLQ

Arabidopsis Description

IIL13-isopropylmalate dehydratase large subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94AR8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.