Factsheet for Bra032708.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01130	Canola	plastid	99.02	99.41
Bra040341.1-P	Field mustard	plastid	95.49	96.63
AT4G13430.1	Thale cress	plastid	93.14	93.32
PGSC0003DMT400035003	Potato	cytosol, plastid	82.35	82.51
Solyc03g005730.2.1	Tomato	plastid	81.96	82.12
PGSC0003DMT400003947	Potato	cytosol	29.8	80.85
PGSC0003DMT400003942	Potato	cytosol	29.8	80.85
VIT_08s0056g01640.t01	Wine grape	plastid	81.57	80.78
VIT_05s0049g01980.t01	Wine grape	plastid	80.39	80.71
KRH17398	Soybean	nucleus	79.02	80.6
GSMUA_Achr2P20910_001	Banana	plastid	68.63	80.28
Zm00001d015088_P002	Maize	plastid	77.65	78.42
EES06213	Sorghum	plastid	77.06	77.51
Zm00001d053960_P003	Maize	plastid	76.67	77.43
TraesCS6B01G108100.2	Wheat	plastid	75.88	76.48
Solyc09g090900.2.1	Tomato	plastid	75.49	76.24
KRG92248	Soybean	plastid	75.29	76.04
TraesCS2B01G181900.1	Wheat	plastid	74.51	75.85
TraesCS6D01G074300.1	Wheat	plastid	75.69	75.69
TraesCS6A01G080600.1	Wheat	plastid	75.49	75.49
Os02t0125100-01	Rice	plastid	75.69	75.1
HORVU6Hr1G013950.5	Barley	plastid	76.08	72.93
GSMUA_Achr10P...	Banana	cytosol	32.35	70.21
Zm00001d053941_P001	Maize	cytosol	44.9	64.69
Zm00001d053950_P001	Maize	cytosol	23.14	50.21
KRH05916	Soybean	plastid	79.61	42.34
Bra011642.1-P	Field mustard	cytosol	20.98	11.92
Bra010508.1-P	Field mustard	cytosol	20.98	11.92
Bra010419.1-P	Field mustard	mitochondrion, plastid	21.76	11.16
Bra019845.1-P	Field mustard	plastid	21.18	10.9
Bra015165.1-P	Field mustard	plastid	18.24	9.15

Protein Annotations

KEGG:00290+4.2.1.33	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:4.1.3.2.5.2.1	MapMan:9.5.1.3.1	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3
InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase_4Fe-4S_dom	EnsemblPlantsGene:Bra032708	EnsemblPlants:Bra032708.1	EnsemblPlants:Bra032708.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0003861	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0008652
GO:GO:0009058	GO:GO:0009987	GO:GO:0016836	GO:GO:0051539	InterPro:Homoacnase/IPMdehydase_lsu	InterPro:IPMI_cat
InterPro:IPR015931	UniProt:M4EV75	PFAM:PF00330	PRINTS:PR00415	PANTHER:PTHR43822	SUPFAM:SSF53732
TIGRFAMs:TIGR01343	UniParc:UPI0002543E07	:	:	:	:

Description

AT4G13430 (E=2e-281) IIL1 | IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1); 4 iron, 4 sulfur cluster binding / hydro-lyase/ lyase

Coordinates

chrA04:+:5303905..5307149

Molecular Weight (calculated)

55171.0 Da

IEP (calculated)

7.598

GRAVY (calculated)

-0.184

Length

510 amino acids

Sequence
(BLAST)

001: MASSVISSSP FVCKSPAKGQ KDLGFSSFRK PSQISIHGCQ RKSISRKIVS VMAPQRSSST SGSVKTGMTM TEKILAKAAE KSQVVPGDNI WVNVDVLMTH
101: DVCGPGAFGI FKREFGDNAK VWDSEKIVVI PDHYIFTTDK RANRNVDIMR EHCREQNIKY FYDITDLGDF RANPDYKGVC HVALAQEGHC RPGEVLLGTD
201: SHTCTAGAFG QFATGIGNTD AGFVLGTGKI LLKVPPTMRF ILDGEMPSYL QAKDLILQII GEISVAGATY KTMEFSGTTI ESLTMEERMT LCNMVVEAGG
301: KNGVIPPDAT TFNYVENRTS VPFQPVYSDA NASFVADYRF DVSKLEPVVA KPHSPDNRAL ARECKDVKID RVYIGSCTGG KTEDFMAAAK LFHAAGKQVK
401: VPTFLVPATQ KVWMDVYALP VPGAGGKTCA QIFEEAGCDT PTSPSCGACL GGPADTYARL NEPQVCVSTT NRNFPGRMGH KEGQIYLASP YTAAASALTG
501: HVTDPREFLQ

Best Arabidopsis Sequence Match ( AT4G13430.1 )
(BLAST)

001: MASVISSSPF LCKSSSKSDL GISSFPKSSQ ISIHRCQKKS ISRKIVSVMA PQKDRSPGTT GSVKTGMTMT EKILARASEK SLVVPGDNIW VNVDVLMTHD
101: VCGPGAFGIF KREFGEKAKV WDPEKIVVIP DHYIFTADKR ANRNVDIMRE HCREQNIKYF YDITDLGNFK ANPDYKGVCH VALAQEGHCR PGEVLLGTDS
201: HTCTAGAFGQ FATGIGNTDA GFVLGTGKIL LKVPPTMRFI LDGEMPSYLQ AKDLILQIIG EISVAGATYK TMEFSGTTIE SLSMEERMTL CNMVVEAGGK
301: NGVIPPDATT LNYVENRTSV PFEPVYSDGN ASFVADYRFD VSKLEPVVAK PHSPDNRALA RECKDVKIDR VYIGSCTGGK TEDFMAAAKL FHAAGRKVKV
401: PTFLVPATQK VWMDVYALPV PGAGGKTCAQ IFEEAGCDTP ASPSCGACLG GPADTYARLN EPQVCVSTTN RNFPGRMGHK EGQIYLASPY TAAASALTGR
501: VADPREFLQ

Arabidopsis Description

IIL13-isopropylmalate dehydratase large subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94AR8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.