Factsheet for VIT_12s0059g02150.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56130	Soybean	mitochondrion	85.41	86.11
PGSC0003DMT400022547	Potato	mitochondrion, plastid	85.21	85.73
KRH22567	Soybean	mitochondrion	85.41	85.67
Solyc12g005860.1.1	Tomato	extracellular, plastid	85.11	85.63
KRH26786	Soybean	mitochondrion	85.31	85.57
VIT_00s0264g00030.t01	Wine grape	mitochondrion	79.53	85.51
KRH25376	Soybean	mitochondrion	85.21	85.47
VIT_19s0090g00460.t01	Wine grape	plastid	86.42	84.54
Solyc07g052350.2.1	Tomato	plastid	85.11	84.42
PGSC0003DMT400074489	Potato	cytosol, extracellular	84.9	84.05
AT2G05710.1	Thale cress	plastid	83.99	83.74
CDY18054	Canola	plastid	83.49	83.57
CDX97969	Canola	plastid	83.38	83.05
CDY50945	Canola	plastid	83.69	83.02
CDX93088	Canola	plastid	83.59	83.0
Bra019845.1-P	Field mustard	plastid	82.98	82.64
KRH15702	Soybean	mitochondrion	16.62	82.0
CDY56501	Canola	plastid	78.12	79.24
Bra015165.1-P	Field mustard	plastid	67.27	65.35
VIT_05s0049g01980.t01	Wine grape	plastid	11.25	21.85
VIT_08s0056g01640.t01	Wine grape	plastid	11.25	21.55

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	EntrezGene:100256776
wikigene:100256776	MapMan:2.3.2	Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2
EMBL:AM439610	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl
InterPro:Aconitase_4Fe-4S_BS	InterPro:Aconitase_4Fe-4S_dom	ProteinID:CAN62964	ProteinID:CAN62964.1	ProteinID:CBI28935	ProteinID:CBI28935.3
UniProt:D7TEL2	EMBL:FN595765	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003994
GO:GO:0005488	GO:GO:0005507	GO:GO:0005524	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005774	GO:GO:0005829
GO:GO:0006101	GO:GO:0006102	GO:GO:0006950	GO:GO:0006979	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009737	GO:GO:0009791	GO:GO:0009987	GO:GO:0016020	GO:GO:0016829
GO:GO:0030312	GO:GO:0046686	GO:GO:0051536	GO:GO:0051539	GO:GO:0090351	InterPro:IPR015928
InterPro:IPR015931	EntrezGene:LOC100256776	wikigene:LOC100256776	PFAM:PF00330	PFAM:PF00694	PRINTS:PR00415
ScanProsite:PS00450	ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF50	SUPFAM:SSF52016	SUPFAM:SSF53732
TIGR:TC57529	TIGRFAMs:TIGR01341	UniParc:UPI00015CB1D8	ArrayExpress:VIT_12s0059g02150	EnsemblPlantsGene:VIT_12s0059g02150	EnsemblPlants:VIT_12s0059g02150.t01
unigene:Vvi.445	RefSeq:XP_002279260	RefSeq:XP_002279260.1	SEG:seg	:	:

Description

Aconitate hydratase [Source:UniProtKB/TrEMBL;Acc:D7TEL2]

Coordinates

chr12:+:6936167..6946432

Molecular Weight (calculated)

107437.0 Da

IEP (calculated)

7.601

GRAVY (calculated)

-0.115

Length

987 amino acids

Sequence
(BLAST)

001: MYITASSLSS SLLRASRAHF SSSLSRVSLS RAISSNPLSS SSLACRSLRF SSSAFRSLRS VNFRPPMSLR AQIGAAVPVV EQFQRRIATM APENAFKGIL
101: TGLPKASGGE FGKYYSLPAL NDPRVDKLPY SIRILLESAI RNCDNFQVTK EDVEKIIDWE NTSPKQVEIP FKPARVILQD FTGVPAVVDL ACMRDAMNKL
201: GSDSNKINPL VPVDLVVDHS VQVDVARSEN AVQANMELEF QRNKERFAFL KWGSTAFHNM LVVPPGSGIV HQVNLEYLGR VVFNADGLLY PDSVVGTDSH
301: TTMIDGLGVA GWGVGGIEAE AAMLGQPMSM VLPGVVGFKL TGKLRNGVTA TDLVLTVTQM LRKHGVVGKF VEFYGDGMAE LSLADRATIA NMSPEYGATM
401: GFFPVDRVTL QYLKLTGRSD ETVALIEAYL RANKMFVDHN EPQQERAYSS YLELDLVNVE PCVSGPKRPH DRVTLKEMKV DWHSCLDNKV GFKGFAVPKE
501: AQDKVAKFSF HGQPAELKHG SVVIAAITSC TNTSNPSVML GAALVAKKAC ELGLEVKPWI KTSLAPGSGV VTKYLLQSGL QKYLNQQGFH IVGYGCTTCI
601: GNSGEIDESV ASAITENDIV AAAVLSGNRN FEGRVHPLTR ANYLASPPLV VAYALAGTVD IDFEKEPIGT GKDGKSVYFK DIWPSTEEIA EVVQSSVLPN
701: MFKSTYEAIT KGNSMWNDLS VPANTLYSWD AKSTYIHEPP YFKNMTMDPP GAHGVKDAYC LLNFGDSITT DHISPAGSIH KDSPAAKYLL ERGVDRKDFN
801: SYGSRRGNDE VMARGTFANI RLVNKLLNGE VGPKTIHVPT GEKLSVFDAA MKYKTANQGT IILAGAEYGS GSSRDWAAKG PMLLGVKAVI AKSFERIHRS
901: NLVGMGIIPL CFKPGEDADT LGLTGHERYT IDLPSNIDEI RPGQDITVTT NTGKSFICTA RFDTEVELAY FNHGGILPYV IRNLIKQ

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.