Factsheet for VIT_19s0090g00460.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0059g02150.t01	Wine grape	plastid	84.54	86.42
VIT_00s0264g00030.t01	Wine grape	mitochondrion	78.0	85.73
GSMUA_Achr5P00710_001	Banana	plastid	83.55	84.89
GSMUA_Achr9P30280_001	Banana	plastid	83.55	84.05
PGSC0003DMT400057191	Potato	plastid	77.5	82.75
TraesCS6B01G440200.1	Wheat	plastid	78.3	80.86
CDY66424	Canola	mitochondrion	77.8	78.89
Bra010419.1-P	Field mustard	mitochondrion, plastid	77.7	78.79
CDY14291	Canola	mitochondrion, plastid	77.6	78.69
AT4G26970.1	Thale cress	mitochondrion	77.5	78.59
TraesCS7D01G223000.1	Wheat	cytosol	57.68	78.44
HORVU7Hr1G045470.22	Barley	cytosol	62.44	77.87
EER97286	Sorghum	mitochondrion	74.43	76.71
TraesCS7A01G219100.1	Wheat	golgi, unclear	67.29	75.11
Zm00001d006476_P004	Maize	mitochondrion	72.35	73.15
KRH30182	Soybean	cytosol	6.74	72.34
KRH26402	Soybean	cytosol, endoplasmic reticulum, plasma membrane	14.57	68.37
CDY19879	Canola	mitochondrion	3.37	39.53
VIT_05s0049g01980.t01	Wine grape	plastid	11.0	21.85
VIT_08s0056g01640.t01	Wine grape	plastid	11.0	21.55

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	EntrezGene:100253811
wikigene:100253811	MapMan:2.3.2	Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2
InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS
InterPro:Aconitase_4Fe-4S_dom	ProteinID:CBI26642	ProteinID:CBI26642.3	UniProt:D7T7Y3	EMBL:FN595751	GO:GO:0008150
GO:GO:0008152	InterPro:IPR015928	InterPro:IPR015931	EntrezGene:LOC100253811	wikigene:LOC100253811	PFAM:PF00330
PFAM:PF00694	PRINTS:PR00415	ScanProsite:PS00450	ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF50
SUPFAM:SSF52016	SUPFAM:SSF53732	TIGR:TC56939	TIGRFAMs:TIGR01341	UniParc:UPI00015C7998	ArrayExpress:VIT_19s0090g00460
EnsemblPlantsGene:VIT_19s0090g00460	EnsemblPlants:VIT_19s0090g00460.t01	unigene:Vvi.3376	RefSeq:XP_002278138	RefSeq:XP_002278138.1	SEG:seg

Description

No Description!

Coordinates

chr19:-:6601743..6614335

Molecular Weight (calculated)

110063.0 Da

IEP (calculated)

7.117

GRAVY (calculated)

-0.167

Length

1009 amino acids

Sequence
(BLAST)

0001: MYMATSPYSS LALLRASRVR FAPSISRVSL SSSSSSSSPH PPCPSRIPAS ASSSSLPFST ISGGYRSLGF LSAFRSRRWS HGVDWRSPVS LRAQIRAAAP
0101: VIERFERKMA TIASEHPFKG ILTSVPKPGG GEFGKFYSLP ALNDPRIDKL PYSIRILLES AIRNCDNFQV TKDDVEKIID WENTSPKQVE IPFKPARVLL
0201: QDFTGVPAVV DLACMRDAMN NLGSDSNKIN PLVPVDLVID HSVQVDVTRS ENAVQANMDL EFQRNKERFS FLKWGSTAFR NMLVVPPGSG IVHQVNLEYL
0301: GRVVFNNDGI LYPDSVVGTD SHTTMIDGLG VAGWGVGGIE AEAAMLGQPM SMVLPGVVGF KLSGKLCSGV TATDLVLTVT QMLRKHGVVG KFVEFYGEGM
0401: GELSLADRAT IANMSPEYGA TMGFFPVDHV TLQYLKLTGR SDETVAMIEA YLRANRMFVD YNEPQVERFY SSYLQLNLED VEPCMSGPKR PHDRVPLKEM
0501: KTDWKACLDN KVGFKGFAVP KEAQDKVAKF SFHGQPAELK HGSVVIAAIT SCTNTSNPSV MLGAGLVAKK ASELGLEVKP WIKTSLAPGS GVVTKYLLQS
0601: GLQKYLNQQG FHIVGYGCTT CIGNSGDLDE SVASAISEND IIAAAVLSGN RNFEGRVHAL TRANYLASPP LVVAYALAGT VDIDFEKEPI GTGKDGKDVY
0701: FKDIWPTSEE IAEVVQSSVL PEMFKSTYEA ITKGNPIWNQ LSVHSSSLYS WDPNSTYIHE PPYFKNMTMN PPGPHGVKDA YCLLNFGDSI TTDHISPAGS
0801: IHKDSPAAKY LIERGVAPKD FNSYGSRRGN DEVMARGTFA NIRIVNKLLN GEVGPKTIHI PTGEKLYVFD AAMRYKADGH DTIVLAGAEY GSGSSRDWAA
0901: KGPMLQGVKA VIAKSFERIH RSNLVGMGII PLCFKAGEDA DTLGLTGHER YNIDLPSKIS EIRPGQDVTV TTDNGKSFTC TVRFDTEVEL EYFNHGGILP
1001: YAIRNLINQ

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.