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Sorghum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d006476_P004 Maize mitochondrion 92.95 91.18
TraesCS7D01G223000.1 Wheat cytosol 57.71 76.15
PGSC0003DMT400057191 Potato plastid 72.63 75.24
HORVU7Hr1G045470.22 Barley cytosol 62.1 75.15
EES14669 Sorghum plastid 76.2 74.9
VIT_19s0090g00460.t01 Wine grape plastid 76.71 74.43
TraesCS7A01G219100.1 Wheat golgi, unclear 67.11 72.68
EER92899 Sorghum plastid 72.83 71.95
CDY66424 Canola mitochondrion 71.6 70.45
CDY14291 Canola mitochondrion, plastid 71.5 70.35
Bra010419.1-P Field mustard mitochondrion, plastid 71.4 70.25
EES10322 Sorghum cytosol 64.45 69.8
AT4G26970.1 Thale cress mitochondrion 70.79 69.65
KRH30182 Soybean cytosol 6.54 68.09
CDY19879 Canola mitochondrion 3.47 39.53
EES06213 Sorghum plastid 11.44 22.09
Protein Annotations
KEGG:00020+4.2.1.3KEGG:00290+4.2.1.33KEGG:00630+4.2.1.3KEGG:00720+4.2.1.3Gene3D:1.10.1440.20MapMan:2.3.2
Gene3D:3.20.19.10Gene3D:3.30.499.10Gene3D:3.30.499.20MapMan:5.7.3.6.2EntrezGene:8080745InterPro:Acnase/IPM_dHydase_lsu_aba_1/3
InterPro:Acoase/IPM_deHydtase_lsu_abaInterPro:Aconitase/3IPM_dehydase_swvlInterPro:Aconitase/IRP2InterPro:AconitaseA/IPMdHydase_ssu_swvlInterPro:Aconitase_4Fe-4S_BSInterPro:Aconitase_4Fe-4S_dom
UniProt:C5X9Z9EnsemblPlants:EER97286ProteinID:EER97286ProteinID:EER97286.1GO:GO:0003674GO:GO:0003824
GO:GO:0003994GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016829GO:GO:0051536
GO:GO:0051539InterPro:IPR015928InterPro:IPR015931PFAM:PF00330PFAM:PF00694PRINTS:PR00415
ScanProsite:PS00450ScanProsite:PS01244PANTHER:PTHR11670PANTHER:PTHR11670:SF50EnsemblPlantsGene:SORBI_3002G316900SUPFAM:SSF52016
SUPFAM:SSF53732unigene:Sbi.15234TIGRFAMs:TIGR01341UniParc:UPI0001A83544RefSeq:XP_002460765.1SEG:seg
Description
hypothetical protein
Coordinates
chr2:+:68974692..68980882
Molecular Weight (calculated)
106862.0 Da
IEP (calculated)
6.903
GRAVY (calculated)
-0.166
Length
979 amino acids
Sequence
(BLAST)
001: MYRAAASPLR HSLRRLSSSY SAATPLAGAA RFLAPSSEGR LSALTSSRLL GSAPCRCCSG AGIAERPASA WRGLATMADG NSRFGHVLTS LPKPGGGEYG
101: KYYSLPALND PRIERLPYSI RYLLESAIRN CDGFQITEKD VENIIDWENT APKLVEIPFK PARVLLQDFT GVPAIVDLAS MRDAMAQLGD DPGKIDPMIP
201: VDLVIDHSVQ ADVVKSENAL QANMQREFDR NKERFAFLRW GSTAFNNMLI VPPGSGIVHQ VNLEYLGRVV FNTDGILYLD SVLGTDSHTT MIDGMGVAGW
301: GVGGIEAEAT MLGQPMSMVL PSVVGFKLTG KLRDGVTATD LVLTVTHILR KHGVVGKFVE FYGEGMSELA VANRATIANM SPEYGATMGF FPVDHVTLGY
401: LKLTGRSDEK VDMVEAYLRA NKMFVDYNET QTERVYSSYL ELDLADVEPC VSGPKRPHDR VALKDMKADW RACLRNKVGF KGFGIPKEQQ DKLVKFTFHG
501: QPAEIRHGSI VIAAITSCTN TSNPSVMLGA GLVAKKACEL GLEVNPWIKT SLAPGSGAVT KYLLKSGLQK YLDHLGFNLI GYGCTTCIGN SGELDEDVAK
601: AVTDNDIIAA AVLSGNRNFE GRIHALVRAN YLASPPLVVA YALAGTVDID FETEPIGKGK NGKDVYFKDI WPSNEEIAEV EQSSVLPDMF RSTYEAITQG
701: NPMWNQLSVP KAKRFPWDPS STYIHDPPFF KDITPTPPGP RSIENAYCLL KFGDSITTDH ISPAGSIPRD SPAGMYLLER GVQPKDFNSY GSRRGNDEVM
801: ARGTFANIRI VNRLLNGEVG PKTIHVPTSD KLFVFDAAMR YKADGHHTIV LAGEEYGSGS SRDWAAKGPM LLGVKAVIAK SFERIHRSNL VGMGVLPLCF
901: KPGEDADSLG LTGHERYTIR LPTNVSEIQP GQDVQVVTDT GKSFTCKLRI DTLVELAYFD HGGILHYVLR NLVKQQQQQ
Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)
001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ
Arabidopsis Description
ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.