CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024952_P005	Maize	cytosol	92.7	93.95
Zm00001d004564_P004	Maize	plastid	95.02	85.64
Zm00001d020428_P001	Maize	cytosol	24.45	82.16
Os06t0303400-00	Rice	plasma membrane	72.57	80.0
TraesCS3B01G213800.1	Wheat	cytosol	55.09	75.91
Zm00001d032214_P001	Maize	mitochondrion, plastid	28.32	71.71
EES14669	Sorghum	plastid	77.88	70.68
TraesCS3B01G213900.1	Wheat	plastid	75.44	67.93
TraesCS3D01G188200.1	Wheat	plastid	75.33	67.83
TraesCS3A01G184000.1	Wheat	plastid	75.55	67.83
EER92899	Sorghum	plastid	72.79	66.4
EER97286	Sorghum	mitochondrion	69.8	64.45
Zm00001d015497_P001	Maize	cytosol	18.03	58.21
Zm00001d040769_P001	Maize	mitochondrion	18.03	58.21
Zm00001d035277_P001	Maize	cytosol, mitochondrion, plastid	30.75	52.95
KRG94138	Soybean	cytosol	4.65	51.22
KRH66899	Soybean	cytosol	4.42	33.9
EES06213	Sorghum	plastid	12.39	22.09

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	MapMan:2.3.2
Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba
InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS	InterPro:Aconitase_4Fe-4S_dom	UniProt:C5YB69
EnsemblPlants:EES10322	ProteinID:EES10322	ProteinID:EES10322.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003994
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016829	GO:GO:0051536	GO:GO:0051539
InterPro:IPR015928	InterPro:IPR015931	PFAM:PF00330	PFAM:PF00694	PRINTS:PR00415	ScanProsite:PS01244
PANTHER:PTHR11670	PANTHER:PTHR11670:SF50	EnsemblPlantsGene:SORBI_3006G000100	SUPFAM:SSF52016	SUPFAM:SSF53732	unigene:Sbi.20436
TIGRFAMs:TIGR01341	UniParc:UPI0003C72CC3	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:11287..19213

Molecular Weight (calculated)

98885.8 Da

IEP (calculated)

6.603

GRAVY (calculated)

-0.141

Length

904 amino acids

Sequence
(BLAST)

001: MANSSATKHA FKSILASLPK PGGGEYGKFF SLPALNDPRI DRLPYSIRVL LESAIRHCDN FQVTESDVEK IIDWENTSPK LAEIPFKPAR CILMDNTGVP
101: AVVDLAAMRD MMPKLGCDPY KINPLIPVDA VIDHAVRVDF AGRHDALDRN EELEFQRNKE RFAFLKWASN AFHNMQVFPP GSGTVHQVNI EYLARVVFNE
201: DGILYFDSVV GTDSHTTMAN SLGVAGWGVG GIEAVVAMLG QPMGMVLPGV VGFKLSGKLR DGVTTTDLVL TMTQMLRKHG AIGKFVEFYG VGVGELSLPA
301: RATIANMSPE YGATMGFFPV DQVALDYLKL TGRSDETVSM IEAYLRANKM FVEHHEPETE RVYSSYLELD LSDVEPCVSG PKRPHDRVPL KEMKSDWHAC
401: LDNEVGFKGY AVPKEQQGKV VKFDFHGRPA EIKHGSVVLA AICSSTNTSN PSVMIGAGLV AKKACELGLE VKPWVKTSLT PGSVVATEYL KHSGLQDYLN
501: QQGFHVAGHG CATCVGNSGD LDQFVSAAII ENDIVAAAVL SANRNFEGRV NPLTRANYLA SPPLVVAYAL AGTVDIDFEK EPVGVGKGGK EVFLRDIWPS
601: NQEIDQVVES SVQTHLFKKV YDSIMERNHR WNELPVPKVA LYPWDDNSTY IRKPTYLEGM SMMPPGPPTV KEAYCLLNLG DSITTDHISY SGKIPEGTPA
701: AKYLLEHGVD PKNFSSYGGR RGNNEVVMRG AFANMRIVNK LLGGKAGPWT IHVPTGEKLY VYDVAMKYKS EGHDMVIIAG AEYGSGSSRD SAAKGPMLLG
801: VKSVIAKSFE RIHRSNLVGM GIIPLCFKAG EDADSLGLTG RERYTIHLPT SIAEISPGQD VTVTTHDGRS FICTLRLDTQ LEVTYFNHGG ILPYMVRNLA
901: AQMK

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.