CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049409_P001	Maize	plasma membrane	96.49	97.37
TraesCS6D01G384200.1	Wheat	plastid	85.34	87.18
TraesCS6B01G440200.1	Wheat	plastid	85.44	87.1
TraesCS6A01G400000.1	Wheat	golgi	85.34	87.09
HORVU6Hr1G091950.9	Barley	cytosol	77.21	83.86
GSMUA_Achr5P00710_001	Banana	plastid	83.43	83.69
GSMUA_Achr9P30280_001	Banana	plastid	83.23	82.65
EER92899	Sorghum	plastid	79.02	79.41
EES10322	Sorghum	cytosol	70.68	77.88
CDY66424	Canola	mitochondrion	77.01	77.09
CDY14291	Canola	mitochondrion, plastid	76.91	76.98
Bra010419.1-P	Field mustard	mitochondrion, plastid	76.81	76.88
EER97286	Sorghum	mitochondrion	74.9	76.2
AT4G26970.1	Thale cress	mitochondrion	76.0	76.08
CDY19879	Canola	mitochondrion	3.41	39.53
EES06213	Sorghum	plastid	11.65	22.88

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	MapMan:2.3.2
Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	EntrezGene:8085012	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3
InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS	InterPro:Aconitase_4Fe-4S_dom
UniProt:C5YIC1	EnsemblPlants:EES14669	ProteinID:EES14669	ProteinID:EES14669.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003994	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016829	GO:GO:0051536
GO:GO:0051539	InterPro:IPR015928	InterPro:IPR015931	PFAM:PF00330	PFAM:PF00694	PRINTS:PR00415
ScanProsite:PS00450	ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF50	EnsemblPlantsGene:SORBI_3007G068100	SUPFAM:SSF52016
SUPFAM:SSF53732	unigene:Sbi.646	TIGRFAMs:TIGR01341	UniParc:UPI0001A87D5A	RefSeq:XP_002445174.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:7566929..7574774

Molecular Weight (calculated)

107906.0 Da

IEP (calculated)

6.856

GRAVY (calculated)

-0.133

Length

996 amino acids

Sequence
(BLAST)

001: MYKAANARLL LRSLSSNSAA SASVPVNNPR LAAASSSSSA ARLALSLPCG AWVGRSSGLV RAAGWSGTRP RFAGARAQIG AAAVPAVERF QRRMATQATE
101: HAFKDILTSL PKPGGGEYGK FYSLPALNDP RIDKLPYSIR ILLESAIRNC DNFQVTKNDV EKIIDWENTS PKLAEIPFKP ARVLLQDFTG VPAVVDLAAM
201: RDAMAKLGSD ANKINPLVPV DLVIDHSVQV DVARSQNAVQ ANMELEFSRN KERFGFLKWG SSAFQNMLVV PPGSGIVHQV NLEYLGRVVF NTDGILYPDS
301: VVGTDSHTTM IDGLGVAGWG VGGIEAEATM LGQPMSMVLP GVVGFKLTGK LRSGVTATDL VLTVTQMLRK HGVVGKFVEF YGEGMGKLSL ADRATIANMS
401: PEYGATMGFF PVDHVTLDYL KLTGRSDETV SMIEAYLRAN KMFVDYNEPP TERIYSSYLE LDLDEVEPSM SGPKRPHDRV PLKEMKSDWH ACLDNKVGFK
501: GFAVPKEQQD KVVKFDFHGQ PAEMKHGSVV IAAITSCTNT SNPSVMLGAG LVAKKACELG LEVKPWVKTS LAPGSGVVTK YLLQSGLQEY LNQQGFHIVG
601: YGCTTCIGNS GDLDESVSAA ITENDVVAAA VLSGNRNFEG RVHPLTRANY LASPPLVVAY ALAGTVDIDF EKEPIGLGKD GKEVYFRDIW PSTEEIAQVV
701: QSSVLPDMFK GTYEAITKGN PMWNQLTVPE ASLYSWDSKS TYIHEPPYFK DMTMSPPGPS AVKDAYCLLN FGDSITTDHI SPAGSIHKDS PAAKYLMERG
801: VDRKDFNSYG SRRGNDEIMA RGTFANIRIV NKFLNGEVGP KTIHVPTGEK LYVFDAAMRY KSEGHATIIL AGAEYGSGSS RDWAAKGPML LGVKAVIAKS
901: FERIHRSNLV GMGIIPLCFK AGEDADSLGL TGHERYSIDL PANLSEIRPG QDVTVITDNG KSFTCTLRFD TEVELAYFNH GGILPYVIRN LAGAQN

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.