Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
16595579
plastid: 18419817 golgi: 23128297 golgi: 25769308 unclear: 25769308 |
msms PMID:
25769308
doi
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID:
18419817
doi
Western Regional Research Center, United States Department of Agriculture, Agricultural Research Service, 800 Buchanan Street, Albany, CA 94710K, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G400000.1 | Wheat | golgi | 98.26 | 98.16 |
| TraesCS6B01G440200.1 | Wheat | plastid | 97.23 | 97.03 |
| HORVU6Hr1G091950.9 | Barley | cytosol | 83.08 | 88.33 |
| Zm00001d049409_P001 | Maize | plasma membrane | 86.87 | 85.82 |
| EES14669 | Sorghum | plastid | 87.18 | 85.34 |
| GSMUA_Achr5P00710_001 | Banana | plastid | 82.15 | 80.66 |
| GSMUA_Achr9P30280_001 | Banana | plastid | 81.74 | 79.46 |
| TraesCS7D01G223000.1 | Wheat | cytosol | 58.26 | 76.55 |
| CDY14291 | Canola | mitochondrion, plastid | 77.74 | 76.18 |
| CDY66424 | Canola | mitochondrion | 77.64 | 76.08 |
| Bra010419.1-P | Field mustard | mitochondrion, plastid | 77.54 | 75.98 |
| AT4G26970.1 | Thale cress | mitochondrion | 76.41 | 74.87 |
| TraesCS3D01G188200.1 | Wheat | plastid | 70.56 | 68.53 |
| CDY19879 | Canola | mitochondrion | 3.38 | 38.37 |
| TraesCS6D01G074300.1 | Wheat | plastid | 11.9 | 22.75 |
Protein Annotations
| KEGG:00020+4.2.1.3 | KEGG:00290+4.2.1.33 | KEGG:00630+4.2.1.3 | KEGG:00720+4.2.1.3 | Gene3D:1.10.1440.20 | MapMan:2.3.2 |
| Gene3D:3.20.19.10 | Gene3D:3.30.499.10 | Gene3D:3.30.499.20 | MapMan:5.7.3.6.2 | InterPro:Acnase/IPM_dHydase_lsu_aba_1/3 | InterPro:Acoase/IPM_deHydtase_lsu_aba |
| InterPro:Aconitase/3IPM_dehydase_swvl | InterPro:Aconitase/IRP2 | InterPro:AconitaseA/IPMdHydase_ssu_swvl | InterPro:Aconitase_4Fe-4S_BS | InterPro:Aconitase_4Fe-4S_dom | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:IPR015928 | InterPro:IPR015931 | PFAM:PF00330 | PFAM:PF00694 | PRINTS:PR00415 |
| ScanProsite:PS00450 | ScanProsite:PS01244 | PANTHER:PTHR11670 | PANTHER:PTHR11670:SF50 | SUPFAM:SSF52016 | SUPFAM:SSF53732 |
| TIGRFAMs:TIGR01341 | EnsemblPlantsGene:TraesCS6D01G384200 | EnsemblPlants:TraesCS6D01G384200.1 | TIGR:cd01580 | TIGR:cd01586 | SEG:seg |
Description
No Description!
Coordinates
chr6D:+:462624316..462631937
Molecular Weight (calculated)
106153.0 Da
IEP (calculated)
6.795
GRAVY (calculated)
-0.174
Length
975 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLPTPPAS SDPYSHHRLP PPPQLRRASF PPAASRPFAG LLRAARVRCS SSSAAGRGRG SVAPAVARFQ RRMAVSGTEH AYSNILTSLP KPEGGEYGKF
101: YSLPALNDPR IDKLPYSIRI LLESAIRNCD GFQVTKNDVE KIIDWENTSP KLAEIPFKPA RVLLQDFTGV PAVVDLAAMR DALAKLGSDA NKINPLVPVD
201: LVIDHSVQVD VARSSNALQS NMELEFTRNR ERFGFLKWGS TAFQNMLVVP PGSGIVHQVN LEYLGRVVFN TDGIMYPDSV VGTDSHTTMI DGLGVAGWGV
301: GGIEAEATML GQPMSMVLPG VVGFKLTGKL RNGVTATDLV LTVTQMLRKH GVVGKFVEFH GEGMGKLSLA DRATIANMSP EYGATMGFFP VDHVTLDYLR
401: LTGRSDETVS MIEAYLRANN MFVDYNEPQL ERVYSSYLAL DLDEVEPCIS GPKRPHDRVT LKDMKSDWHA CLDNKVGFKG FAVPKEQQDK VVKFDFNGQP
501: AELKHGSVVI AAITSCTNTS NPSVMLGAAL VAKKACELGL EVKPWVKTSL APGSGVVTKY LLKSGLQEYF NKQGFHLVGY GCTTCIGNSG ELHESVSAAI
601: TENDVVAAAV LSGNRNFEGR VHPLTRANYL ASPPLVVAYA LAGTVDIDFE KEPIGVGKDG KEVFFRDIWP TTEEIAEVVQ SSVLPDMFKS TYEAITKGNP
701: MWNELPVPEA SLYSWDSNST YIHEPPYFKD MTMSPPGPHA VKNAYCLLNF GDSITTDHIS PAGSIHRDSP AAKYLLERGV DRKDFNSYGS RRGNDEVMAR
801: GTFANIRIVN KFLGGEVGPK TIHVPTGEKL SVFDAATKYK SEGHDTIILA GAEYGSGSSR DWAAKGPMLL GVKAVISKSF ERIHRSNLVG MGIIPLCFKA
901: GEDADSLGLT GHERYTINLP TDVSEIRPGQ DVTITTDNDK SFTCILRFDT EVELAYYNHG GILPYVIRNM AAAQN
101: YSLPALNDPR IDKLPYSIRI LLESAIRNCD GFQVTKNDVE KIIDWENTSP KLAEIPFKPA RVLLQDFTGV PAVVDLAAMR DALAKLGSDA NKINPLVPVD
201: LVIDHSVQVD VARSSNALQS NMELEFTRNR ERFGFLKWGS TAFQNMLVVP PGSGIVHQVN LEYLGRVVFN TDGIMYPDSV VGTDSHTTMI DGLGVAGWGV
301: GGIEAEATML GQPMSMVLPG VVGFKLTGKL RNGVTATDLV LTVTQMLRKH GVVGKFVEFH GEGMGKLSLA DRATIANMSP EYGATMGFFP VDHVTLDYLR
401: LTGRSDETVS MIEAYLRANN MFVDYNEPQL ERVYSSYLAL DLDEVEPCIS GPKRPHDRVT LKDMKSDWHA CLDNKVGFKG FAVPKEQQDK VVKFDFNGQP
501: AELKHGSVVI AAITSCTNTS NPSVMLGAAL VAKKACELGL EVKPWVKTSL APGSGVVTKY LLKSGLQEYF NKQGFHLVGY GCTTCIGNSG ELHESVSAAI
601: TENDVVAAAV LSGNRNFEGR VHPLTRANYL ASPPLVVAYA LAGTVDIDFE KEPIGVGKDG KEVFFRDIWP TTEEIAEVVQ SSVLPDMFKS TYEAITKGNP
701: MWNELPVPEA SLYSWDSNST YIHEPPYFKD MTMSPPGPHA VKNAYCLLNF GDSITTDHIS PAGSIHRDSP AAKYLLERGV DRKDFNSYGS RRGNDEVMAR
801: GTFANIRIVN KFLGGEVGPK TIHVPTGEKL SVFDAATKYK SEGHDTIILA GAEYGSGSSR DWAAKGPMLL GVKAVISKSF ERIHRSNLVG MGIIPLCFKA
901: GEDADSLGLT GHERYTINLP TDVSEIRPGQ DVTITTDNDK SFTCILRFDT EVELAYYNHG GILPYVIRNM AAAQN
001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ
Arabidopsis Description
ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.