Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
23128297
golgi: 25769308 mitochondrion: 26136264 |
msms PMID:
25769308
doi
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID:
26136264
doi
College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G384200.1 | Wheat | plastid | 98.16 | 98.26 |
| TraesCS6B01G440200.1 | Wheat | plastid | 96.62 | 96.52 |
| HORVU6Hr1G091950.9 | Barley | cytosol | 82.99 | 88.33 |
| Zm00001d049409_P001 | Maize | plasma membrane | 86.58 | 85.61 |
| EES14669 | Sorghum | plastid | 87.09 | 85.34 |
| GSMUA_Achr5P00710_001 | Banana | plastid | 82.17 | 80.77 |
| GSMUA_Achr9P30280_001 | Banana | plastid | 81.56 | 79.36 |
| TraesCS5A01G505000.2 | Wheat | golgi | 80.12 | 78.59 |
| CDY14291 | Canola | mitochondrion, plastid | 77.36 | 75.88 |
| CDY66424 | Canola | mitochondrion | 77.25 | 75.78 |
| Bra010419.1-P | Field mustard | mitochondrion, plastid | 77.15 | 75.68 |
| AT4G26970.1 | Thale cress | mitochondrion | 76.23 | 74.77 |
| TraesCS7A01G219100.1 | Wheat | golgi, unclear | 67.62 | 73.01 |
| TraesCS3A01G184000.1 | Wheat | plastid | 70.39 | 68.22 |
| CDY19879 | Canola | mitochondrion | 3.38 | 38.37 |
| TraesCS6A01G080600.1 | Wheat | plastid | 11.89 | 22.75 |
Protein Annotations
| KEGG:00020+4.2.1.3 | KEGG:00290+4.2.1.33 | KEGG:00630+4.2.1.3 | KEGG:00720+4.2.1.3 | Gene3D:1.10.1440.20 | MapMan:2.3.2 |
| Gene3D:3.20.19.10 | Gene3D:3.30.499.10 | Gene3D:3.30.499.20 | MapMan:5.7.3.6.2 | InterPro:Acnase/IPM_dHydase_lsu_aba_1/3 | InterPro:Acoase/IPM_deHydtase_lsu_aba |
| InterPro:Aconitase/3IPM_dehydase_swvl | InterPro:Aconitase/IRP2 | InterPro:AconitaseA/IPMdHydase_ssu_swvl | InterPro:Aconitase_4Fe-4S_BS | InterPro:Aconitase_4Fe-4S_dom | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:IPR015928 | InterPro:IPR015931 | PFAM:PF00330 | PFAM:PF00694 | PRINTS:PR00415 |
| ScanProsite:PS00450 | ScanProsite:PS01244 | PANTHER:PTHR11670 | PANTHER:PTHR11670:SF50 | SUPFAM:SSF52016 | SUPFAM:SSF53732 |
| TIGRFAMs:TIGR01341 | EnsemblPlantsGene:TraesCS6A01G400000 | EnsemblPlants:TraesCS6A01G400000.1 | TIGR:cd01580 | TIGR:cd01586 | SEG:seg |
Description
No Description!
Coordinates
chr6A:+:609446618..609453800
Molecular Weight (calculated)
106210.0 Da
IEP (calculated)
6.869
GRAVY (calculated)
-0.184
Length
976 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLPPPPAA PCCSSDPSSH HRRLPPPPQL RRAAFPPAAS RPFAGLLRAA RVRCSSSTSG RGRGSVARFQ RSSMAASGTE HAYNNILTSL PKPEGGEYGK
101: FYSLPALNDP RIDKLPYSIR ILLESAIRNC DGFQVTKNDV EKIIDWENTS PKLAEIPFKP ARVLLQDFTG VPAVVDLAAM RDALAKLGSD ANKINPLVPV
201: DLVIDHSVQV DVARSSNALQ SNMELEFTRN RERFGFLKWG STAFQNMLVV PPGSGIVHQV NLEYLGRVVF NTDGIMYPDS VVGTDSHTTM IDGLGVAGWG
301: VGGIEAEATM LGQPMSMVLP GVVGFKLSGK LRNGVTATDL VLTVTQMLRK HGVVGKFVEF HGEGMGKLSL ADRATIANMS PEYGATMGFF PVDHVTLDYL
401: RLTGRSDETV SMIEAYLRAN NMFVDYNEPQ LERVYSSYLA LDLDEVEPCI SGPKRPHDRV TLKDMKSDWH ACLDNKVGFK GFAVPKEQQD KVVKFDFNGQ
501: PAELKHGSVV IAAITSCTNT SNPSVMLGAA LVAKKACELG LEVKPWVKTS LAPGSGVVTK YLLKSGLQEY FNKQGFHLVG YGCTTCIGNS GELHESVSAA
601: ITENDVVAAA VLSGNRNFEG RVHPLTRANY LASPPLVVAY ALAGTVDIDF EKEPIGVGKD GKEVFFRDIW PTTEEIAEVV QSSVLPDMFK STYEAITKGN
701: PMWNQLPVPE ASLYSWDSNS TYIHEPPYFK DMTMSPPGPH AVKNAYCLLN FGDSITTDHI SPAGSIHRDS PAAKYLLERG VDRKDFNSYG SRRGNDEVMA
801: RGTFANIRIV NKFLGGEVGP KTIHVPTGEK LSVFDAATKY KSEGHDTIIL AGAEYGSGSS RDWAAKGPML LGVKAVISKS FERIHRSNLV GMGIIPLCFK
901: AGEDADSLGL TGHERYTINL PTDVSEIRPG QDVTITTDND KSFTCILRFD TEVELAYYNH GGILPYVIRN MAAAQN
101: FYSLPALNDP RIDKLPYSIR ILLESAIRNC DGFQVTKNDV EKIIDWENTS PKLAEIPFKP ARVLLQDFTG VPAVVDLAAM RDALAKLGSD ANKINPLVPV
201: DLVIDHSVQV DVARSSNALQ SNMELEFTRN RERFGFLKWG STAFQNMLVV PPGSGIVHQV NLEYLGRVVF NTDGIMYPDS VVGTDSHTTM IDGLGVAGWG
301: VGGIEAEATM LGQPMSMVLP GVVGFKLSGK LRNGVTATDL VLTVTQMLRK HGVVGKFVEF HGEGMGKLSL ADRATIANMS PEYGATMGFF PVDHVTLDYL
401: RLTGRSDETV SMIEAYLRAN NMFVDYNEPQ LERVYSSYLA LDLDEVEPCI SGPKRPHDRV TLKDMKSDWH ACLDNKVGFK GFAVPKEQQD KVVKFDFNGQ
501: PAELKHGSVV IAAITSCTNT SNPSVMLGAA LVAKKACELG LEVKPWVKTS LAPGSGVVTK YLLKSGLQEY FNKQGFHLVG YGCTTCIGNS GELHESVSAA
601: ITENDVVAAA VLSGNRNFEG RVHPLTRANY LASPPLVVAY ALAGTVDIDF EKEPIGVGKD GKEVFFRDIW PTTEEIAEVV QSSVLPDMFK STYEAITKGN
701: PMWNQLPVPE ASLYSWDSNS TYIHEPPYFK DMTMSPPGPH AVKNAYCLLN FGDSITTDHI SPAGSIHRDS PAAKYLLERG VDRKDFNSYG SRRGNDEVMA
801: RGTFANIRIV NKFLGGEVGP KTIHVPTGEK LSVFDAATKY KSEGHDTIIL AGAEYGSGSS RDWAAKGPML LGVKAVISKS FERIHRSNLV GMGIIPLCFK
901: AGEDADSLGL TGHERYTINL PTDVSEIRPG QDVTITTDND KSFTCILRFD TEVELAYYNH GGILPYVIRN MAAAQN
001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ
Arabidopsis Description
ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.