Factsheet for Zm00001d048358_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92899	Sorghum	plastid	97.17	96.97
Zm00001d027558_P003	Maize	plastid	96.66	93.36
Os03t0136900-01	Rice	mitochondrion	92.42	92.7
HORVU4Hr1G080640.1	Barley	mitochondrion	85.84	91.68
TraesCS4B01G335100.1	Wheat	endoplasmic reticulum	72.9	90.24
TraesCS5A01G505000.2	Wheat	golgi	89.38	88.84
Bra011642.1-P	Field mustard	cytosol	75.63	83.3
CDX69174	Canola	cytosol	75.83	83.24
KRH28848	Soybean	cytosol, nucleus	75.83	83.24
VIT_00s0264g00030.t01	Wine grape	mitochondrion	77.25	83.22
GSMUA_Achr11P...	Banana	plastid	82.91	83.16
Bra010508.1-P	Field mustard	cytosol	75.43	83.07
AT4G35830.1	Thale cress	cytosol	75.43	83.07
KRH76600	Soybean	endoplasmic reticulum	75.63	83.02
CDY41626	Canola	cytosol	75.13	82.1
CDX75532	Canola	cytosol	76.24	81.51
CDY24823	Canola	cytosol	75.43	80.91
Zm00001d049409_P001	Maize	plasma membrane	78.77	78.93
GSMUA_Achr11P...	Banana	plastid	78.26	77.32
CDX91508	Canola	cytosol	6.17	74.39
Zm00001d024952_P005	Maize	cytosol	65.32	72.42
Zm00001d006476_P004	Maize	mitochondrion	70.58	69.94
CDY44621	Canola	cytosol	6.77	67.68
Zm00001d004564_P004	Maize	plastid	67.95	67.0
Zm00001d020428_P001	Maize	cytosol	17.69	65.06
Zm00001d032214_P001	Maize	mitochondrion, plastid	20.53	56.86
Zm00001d035277_P001	Maize	cytosol, mitochondrion, plastid	24.06	45.33
Zm00001d015497_P001	Maize	cytosol	12.23	43.21
Zm00001d040769_P001	Maize	mitochondrion	12.23	43.21
Zm00001d015088_P002	Maize	plastid	10.92	21.39
Zm00001d053960_P003	Maize	plastid	10.62	20.79
Zm00001d053941_P001	Maize	cytosol	6.67	18.64
Zm00001d053950_P001	Maize	cytosol	3.74	15.74

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	EntrezGene:100304315
MapMan:2.3.2	Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	MapMan:5.7.3.6.2	UniProt:A0A1D6PJL0
ProteinID:AQL09485.1	ProteinID:AQL09486.1	InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2
InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS	InterPro:Aconitase_4Fe-4S_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0003994
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016829	GO:GO:0051536	GO:GO:0051539
InterPro:IPR015928	InterPro:IPR015931	PFAM:PF00330	PFAM:PF00694	PRINTS:PR00415	ScanProsite:PS00450
ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF49	SUPFAM:SSF52016	SUPFAM:SSF53732	TIGRFAMs:TIGR01341
UniParc:UPI0004DE95F8	EnsemblPlantsGene:Zm00001d048358	EnsemblPlants:Zm00001d048358_P002	EnsemblPlants:Zm00001d048358_T002	SEG:seg	:

Description

aconitase3 aconitase3

Coordinates

chr9:-:154915042..154923673

Molecular Weight (calculated)

106796.0 Da

IEP (calculated)

6.733

GRAVY (calculated)

-0.179

Length

989 amino acids

Sequence
(BLAST)

001: MPPLTSSLLS RSTTGGSSAR GVAVAAAISR PAADAAPSSS SPPARPTPRP RPSPASPFAS GLAGRLFGGH RAATRSASSA AAVFERRFAS AATRNSYDEI
101: LTGLGRPGGG EEFGKYYSLP ALSDPRIDRL PYSIRILLES AIRNCDDFQV TGKDVEKILD WERSAPKQVE IPFKPARVLL QDFTGVPAVV DLACMRDAMS
201: KLGSDPNKIN PLVPVDLVID HSVQVDVARS ANAAQANMEL EFYRNKERFG FLKWGSSAFR NMLVVPPGSG IVHQVNLEYL ARVVFNNGGI LYPDSVVGTD
301: SHTTMIDGLG VAGWGVGGIE AEAAMLGQPM SMVLPGVVGF KLSGKLRNGV TATDLVLTVT QMLRKHGVVG KFVEFYGQGM SELSLADRAT IANMSPEYGA
401: TMGFFPVDGK TLDYLKLTGR SDDTVAMVES YLRANKMFVD HSQAEAERVY SSYLELNLEE VEPCLSGPKR PHDRVTLKNM KSDWLSCLDS DVGFKGFAVP
501: KESQGKVAEF LFHGTPAKIK HGDVVIAAIT SCTNTSNPNV MLGAALVAKK ACELGLEVKP WIKTSLAPGS GVVKQYLDKS GLQKYLDQLG FNIVGYGCTT
601: CIGNSGELDE SVSAAITEND IVSAAVLSGN RNFEGRVHPL TRANYLASPP LVVAYALAGT VNIDFEKEPI GISKDGKEVY FRDVWPSTEE IAEVVKSSVL
701: PDMFKSTYES ITQGNPMWNE LPVSTSTLYP WDPSSTYIHE PPYFKDMTMT PPGPRPVKDA YCLLNFGDSI TTDHISPAGN IHPDSAAATY LKERGVERKD
801: FNSYGSRRGN DEIMARGTFA NIRLVNKFLK GEVGPKTIHV PSGDKLSVFD AAMKYKNEGH DTIILAGAEY GSGSSRDWAA KGPMLQGVKA VIAKSFERIH
901: RSNLAGMGII PLCFKAGEDA DTLGLTGHER YTVHLPTNVS EIKPGQDVTV TTDNGKSFTC TLRFDTEVEL AYYDHGGILP YVIRKIAEQ

Best Arabidopsis Sequence Match ( AT5G54950.1 )
(BLAST)

1: MAFKSGEDAE TLGLTGHELY TIHLPSNINE IKPGQDITVT TDTAKSFVCT LRLDTEIWVL CFIKKQVNSV SDNV

Arabidopsis Description

Aconitase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FFT5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.