Factsheet for Os03t0136900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 7
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998
mitochondrion: 23027867
mitochondrion: 23356873
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 23356873 doi

S Huang, RP Jacoby, RN Shingaki-Wells, L Li, AH Millar

ARC Centre of Excellence in Plant Energy Biology and Centre for Comparative Analysis of Biomolecular Networks (CABiN), The University of Western Australia, Bayliss Building M316, 35 Stirling Highway, Crawley, WA, 6009, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G080640.1	Barley	mitochondrion	87.42	93.09
Zm00001d048358_P002	Maize	plastid	92.7	92.42
EER92899	Sorghum	plastid	92.8	92.33
TraesCS4B01G335100.1	Wheat	endoplasmic reticulum	73.83	91.11
TraesCS5A01G505000.2	Wheat	golgi	90.47	89.65
Zm00001d027558_P003	Maize	plastid	92.9	89.45
Bra011642.1-P	Field mustard	cytosol	77.69	85.3
Bra010508.1-P	Field mustard	cytosol	77.48	85.08
AT4G35830.1	Thale cress	cytosol	77.38	84.97
CDX69174	Canola	cytosol	77.59	84.91
GSMUA_Achr11P...	Banana	plastid	84.89	84.89
VIT_00s0264g00030.t01	Wine grape	mitochondrion	78.7	84.53
KRH28848	Soybean	cytosol, nucleus	77.08	84.35
KRH76600	Soybean	endoplasmic reticulum	76.88	84.13
CDY41626	Canola	cytosol	77.18	84.09
CDX75532	Canola	cytosol	78.09	83.24
CDY24823	Canola	cytosol	77.48	82.86
GSMUA_Achr11P...	Banana	plastid	79.61	78.42
CDX91508	Canola	cytosol	6.39	76.83
Os06t0303400-00	Rice	plasma membrane	58.82	70.73
CDY44621	Canola	cytosol	6.9	68.69
Os08t0191100-01	Rice	mitochondrion	1.52	68.18
Os02t0125100-01	Rice	plastid	10.85	20.82

Protein Annotations

KEGG:00020+4.2.1.3	KEGG:00290+4.2.1.33	KEGG:00630+4.2.1.3	KEGG:00720+4.2.1.3	Gene3D:1.10.1440.20	MapMan:2.3.2
Gene3D:3.20.19.10	Gene3D:3.30.499.10	Gene3D:3.30.499.20	EntrezGene:4331547	MapMan:5.7.3.6.2	ProteinID:ABF93861.1
InterPro:Acnase/IPM_dHydase_lsu_aba_1/3	InterPro:Acoase/IPM_deHydtase_lsu_aba	InterPro:Aconitase/3IPM_dehydase_swvl	InterPro:Aconitase/IRP2	InterPro:AconitaseA/IPMdHydase_ssu_swvl	InterPro:Aconitase_4Fe-4S_BS
InterPro:Aconitase_4Fe-4S_dom	ProteinID:BAF10812.1	ProteinID:BAS82189.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0003994	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005576
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005829
GO:GO:0005886	GO:GO:0005975	GO:GO:0006097	GO:GO:0006101	GO:GO:0006102	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009506	GO:GO:0009605	GO:GO:0009628	GO:GO:0009651
GO:GO:0009987	GO:GO:0009991	GO:GO:0016020	GO:GO:0016829	GO:GO:0046872	GO:GO:0048027
GO:GO:0048046	GO:GO:0051536	GO:GO:0051539	GO:GO:1990641	InterPro:IPR015928	InterPro:IPR015931
EnsemblPlantsGene:Os03g0136900	EnsemblPlants:Os03t0136900-01	PFAM:PF00330	PFAM:PF00694	PRINTS:PR00415	ScanProsite:PS00450
ScanProsite:PS01244	PANTHER:PTHR11670	PANTHER:PTHR11670:SF49	UniProt:Q10S34	SUPFAM:SSF52016	SUPFAM:SSF53732
TIGRFAMs:TIGR01341	UniParc:UPI0000DB40D5	RefSeq:XP_015631409.1	SEG:seg	:	:

Description

Similar to Aconitate hydratase, cytoplasmic (EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase). (Os03t0136900-01);Similar to Aconitate hydratase 2, mitochondrial. (Os03t0136900-02)

Coordinates

chr3:-:2026831..2033506

Molecular Weight (calculated)

106308.0 Da

IEP (calculated)

6.895

GRAVY (calculated)

-0.163

Length

986 amino acids

Sequence
(BLAST)

001: MPPLTSALLS RSSSTRIPAA AAAAAAISNP AGAAASSSSP SPPPPSSRPR PASPFASGLA GRIFGGRRAA ARSSSSAAAV FERRFASAAA KNSYDEILTG
101: LAKPGGGAEF GKYYSLPALS DPRIERLPYS IRILLESAIR NCDEFQVTGK DVEKILDWEN SAPKQVEIPF KPARVLLQDF TGVPAVVDLA CMRDAMSKLG
201: SDPNKINPLV PVDLVIDHSV QVDVARSENA VQANMELEFH RNKERFGFLK WGSTAFRNML VVPPGSGIVH QVNLEYLARV VFNNGGILYP DSVVGTDSHT
301: TMIDGLGVAG WGVGGIEAEA TMLGQPMSMV LPGVVGFKLT GKLRNGVTAT DLVLTVTQML RKHGVVGKFV EFYGGGMSEL SLADRATIAN MSPEYGATMG
401: FFPVDGKTLD YLKLTGRSDD TVAMIESYLR ANKMFVDYNQ PEAERVYSSY LELNLEEVEP CLSGPKRPHD RVTLKNMKSD WLSCLDNDVG FKGFAVPKES
501: QGKVAEFSFH GTPAKLKHGD VVIAAITSCT NTSNPNVMLG AALVAKKACE LGLEVKPWIK TSLAPGSGVV KKYLDKSGLQ KYLDQLGFHI VGYGCTTCIG
601: NSGELDETVS AAISDNDIVA AAVLSGNRNF EGRVHALTRA NYLASPPLVV AYALAGTVNI DFEKEPIGIS KDGKEVYFRD IWPSTEEIAE VVKSSVLPDM
701: FKSTYEAITK GNPMWNELSV SASTLYPWDP TSTYIHEPPY FKDMTMSPPG PRPVKDAYCL LNFGDSITTD HISPAGSIHP DSPAARYLKE RGVERKDFNS
801: YGSRRGNDEI MARGTFANIR LVNKFLKGEV GPKTIHIPSG EKLSVFDAAT KYKNEGHDTI ILAGAEYGSG SSRDWAAKGP MLQGVKAVIA KSFERIHRSN
901: LAGMGIIPLC FKSGEDADTL GLTGHERFTV HLPANVSEIK PGQDVTVTTD NGKSFTCTLR FDTEVELAYY DNGGILPYVI RKIAEQ

Best Arabidopsis Sequence Match ( AT2G05710.1 )
(BLAST)

001: MYLTASSSAS SSIIRAASSR SSSLFSFRSV LSPSVSSTSP SSLLARRSFG TISPAFRRWS HSFHSKPSPF RFTSQIRAVS PVLDRLQRTF SSMASEHPFK
101: GIFTTLPKPG GGEFGKFYSL PALNDPRVDK LPYSIRILLE SAIRNCDNFQ VTKEDVEKII DWEKTSPKQV EIPFKPARVL LQDFTGVPAV VDLACMRDAM
201: NKLGSDSNKI NPLVPVDLVI DHSVQVDVAR SENAVQANME LEFQRNKERF AFLKWGSTAF QNMLVVPPGS GIVHQVNLEY LGRVVFNTKG LLYPDSVVGT
301: DSHTTMIDGL GVAGWGVGGI EAEATMLGQP MSMVLPGVVG FKLAGKMRNG VTATDLVLTV TQMLRKHGVV GKFVEFYGNG MSGLSLADRA TIANMSPEYG
401: ATMGFFPVDH VTLQYLKLTG RSDETVAMIE AYLRANNMFV DYNEPQQDRV YSSYLELNLD DVEPCISGPK RPHDRVTLKE MKADWHSCLD SKVGFKGFAI
501: PKEAQEKVVN FSFDGQPAEL KHGSVVIAAI TSCTNTSNPS VMLGAGLVAK KACDLGLQVK PWIKTSLAPG SGVVTKYLLK SGLQEYLNEQ GFNIVGYGCT
601: TCIGNSGEIN ESVGAAITEN DIVAAAVLSG NRNFEGRVHP LTRANYLASP PLVVAYALAG TVNIDFETEP IGKGKNGKDV FLRDIWPTTE EIAEVVQSSV
701: LPDMFRATYE SITKGNPMWN KLSVPENTLY SWDPNSTYIH EPPYFKDMTM DPPGPHNVKD AYCLLNFGDS ITTDHISPAG NIQKDSPAAK FLMERGVDRK
801: DFNSYGSRRG NDEIMARGTF ANIRIVNKLM NGEVGPKTVH IPSGEKLSVF DAAMRYKSSG EDTIILAGAE YGSGSSRDWA AKGPMLQGVK AVIAKSFERI
901: HRSNLVGMGI IPLCFKSGED ADTLGLTGHE RYTIHLPTDI SEIRPGQDVT VTTDNGKSFT CTVRFDTEVE LAYFNHGGIL PYVIRNLSKQ

Arabidopsis Description

ACO3Aconitate hydratase 3, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SIB9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.