CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049959_P001	Maize	mitochondrion	98.03	97.07
Os05t0301700-01	Rice	mitochondrion	96.38	96.38
TraesCS7D01G277900.1	Wheat	mitochondrion	94.08	94.08
TraesCS7B01G175500.1	Wheat	mitochondrion	94.08	94.08
TraesCS7A01G278100.1	Wheat	golgi, unclear	94.08	94.08
Bra025544.1-P	Field mustard	cytosol	25.33	93.9
HORVU7Hr1G058850.1	Barley	mitochondrion	93.42	93.42
Solyc02g093900.2.1	Tomato	nucleus, plastid	79.61	89.96
Bra032991.1-P	Field mustard	mitochondrion	85.2	84.36
CDY34168	Canola	mitochondrion	85.2	84.36
Bra039089.1-P	Field mustard	mitochondrion	84.87	84.04
CDY28482	Canola	mitochondrion	84.87	84.04
VIT_14s0171g00330.t01	Wine grape	mitochondrion	85.53	83.87
AT5G40810.1	Thale cress	mitochondrion	84.54	83.71
CDY13693	Canola	mitochondrion	84.54	83.71
AT3G27240.1	Thale cress	mitochondrion	83.88	83.06
KRG94438	Soybean	mitochondrion	83.88	83.06
GSMUA_Achr1P09720_001	Banana	mitochondrion	82.89	82.62
KRH07017	Soybean	mitochondrion	83.22	82.41
GSMUA_Achr7P05470_001	Banana	mitochondrion	83.55	82.2
GSMUA_Achr1P18150_001	Banana	mitochondrion	82.89	82.08
KRG94326	Soybean	mitochondrion	82.57	81.76
KRH57638	Soybean	mitochondrion	82.24	81.17
PGSC0003DMT400052104	Potato	mitochondrion	82.24	80.65
PGSC0003DMT400073387	Potato	mitochondrion	83.55	79.38
Solyc06g067920.2.1	Tomato	endoplasmic reticulum, nucleus, unclear	83.55	79.38
VIT_09s0002g05950.t01	Wine grape	endoplasmic reticulum, golgi	81.25	78.16
PGSC0003DMT400073726	Potato	mitochondrion	81.91	76.85
Solyc12g042920.1.1	Tomato	nucleus	81.91	76.85
Zm00001d031967_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	92.43	76.78
Bra025260.1-P	Field mustard	mitochondrion	74.67	74.67
CDY20058	Canola	plastid	84.87	70.88
CDX83670	Canola	mitochondrion	84.54	69.09
CDY00164	Canola	endoplasmic reticulum	84.21	67.55
CDY36384	Canola	plastid	39.47	58.82

Protein Annotations

Gene3D:1.10.760.10	Gene3D:1.20.5.100	MapMan:2.4.3.2	UniProt:A0A1B6PIA7	InterPro:Cyt_c-like_dom	InterPro:Cyt_c-like_dom_sf
InterPro:Cyt_c1	InterPro:Cyt_c1_TM_anchor_C	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0020037	GO:GO:0022900
GO:GO:0046872	InterPro:IPR009056	InterPro:IPR036909	EnsemblPlants:KXG25408	ProteinID:KXG25408	ProteinID:KXG25408.1
PFAM:PF02167	PRINTS:PR00603	PFscan:PS51007	PANTHER:PTHR10266	PANTHER:PTHR10266:SF6	EnsemblPlantsGene:SORBI_3007G171500
SUPFAM:SSF46626	SUPFAM:SSF81496	UniParc:UPI00022071DF	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:60679797..60682183

Molecular Weight (calculated)

33152.5 Da

IEP (calculated)

6.606

GRAVY (calculated)

-0.214

Length

304 amino acids

Sequence
(BLAST)

001: MAAARGINQL LKRTLHNQSA GSSLLSSLRG KHEESSAGLR ALALLGVGAS GLLSFATIAS ADEAEHGLAA PDYPWPHAGI MSSYDHASIR RGHQVYTQVC
101: ASCHSMSLIS YRDLVGVAYT EEETKAMAAE IEVVDGPNDE GEMFTRPGKL SDRFPQPYAN EQAARFANGG AYPPDLSLIT KARHNGQNYV FALLTGYRDP
201: PAGVQIREGL HYNPYFPGGA IAMPKMLNDG AVEYEDGTPA TEAQMGKDVV SFLSWAAEPE MEERKLMGVK WIFLLSLALL QAAYYRRMKW SVLKSRKLVL
301: DVVN

Best Arabidopsis Sequence Match ( AT5G40810.1 )
(BLAST)

001: MVGGGVIRQL LRRKLHSQSV ATPVLSWLSS KKANEDAGSA GLRAFALMGA GITGLLSFST VASADEAEHG LECPNYPWPH EGILSSYDHA SIRRGHQVYQ
101: QVCASCHSMS LISYRDLVGV AYTEEEAKAM AAEIEVVDGP NDEGEMFTRP GKLSDRLPEP YSNESAARFA NGGAYPPDLS LVTKARHNGQ NYVFALLTGY
201: RDPPAGISIR EGLHYNPYFP GGAIAMPKML NDEAVEYEDG TPATEAQMGK DVVSFLSWAA EPEMEERKLM GFKWIFLLSL ALLQAAYYRR LKWSVLKSRK
301: LVLDVVN

Arabidopsis Description

CYC12Cytochrome c1 2, heme protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FKS5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.