CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
golgi 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13693	Canola	mitochondrion	80.91	98.05
CDY28482	Canola	mitochondrion	79.84	96.74
CDY34168	Canola	mitochondrion	79.57	96.42
AT3G27240.1	Thale cress	mitochondrion	79.3	96.09
HORVU3Hr1G098650.1	Barley	cytosol, peroxisome, plastid	50.27	93.97
Solyc02g093900.2.1	Tomato	nucleus, plastid	65.59	90.71
Bra025260.1-P	Field mustard	mitochondrion	73.39	89.8
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, mitochondrion, plastid	9.14	89.47
KXG25408	Sorghum	mitochondrion	69.09	84.54
KRG94438	Soybean	mitochondrion	69.62	84.36
CDY20058	Canola	plastid	82.26	84.07
Os05t0301700-01	Rice	mitochondrion	68.55	83.88
KRH07017	Soybean	mitochondrion	69.09	83.71
PGSC0003DMT400052104	Potato	mitochondrion	69.62	83.55
Zm00001d049959_P001	Maize	mitochondrion	68.55	83.06
TraesCS7A01G278100.1	Wheat	golgi, unclear	67.74	82.89
TraesCS7B01G175500.1	Wheat	mitochondrion	67.74	82.89
TraesCS7D01G277900.1	Wheat	mitochondrion	67.74	82.89
VIT_14s0171g00330.t01	Wine grape	mitochondrion	68.82	82.58
KRH57638	Soybean	mitochondrion	68.01	82.14
KRG94326	Soybean	mitochondrion	67.74	82.08
HORVU7Hr1G058850.1	Barley	mitochondrion	66.94	81.91
Os01t0935700-02	Rice	mitochondrion	66.94	81.91
TraesCS3D01G451000.1	Wheat	mitochondrion	66.67	80.78
CDY00164	Canola	endoplasmic reticulum	81.99	80.47
TraesCS3A01G458200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	66.94	77.57
Zm00001d031967_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	67.2	68.31
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, vacuole	24.46	66.91
CDY36384	Canola	plastid	33.33	60.78
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	17.74	58.41
GSMUA_Achr5P17710_001	Banana	cytosol	33.33	50.61

Protein Annotations

Gene3D:1.10.760.10	Gene3D:1.20.5.100	MapMan:2.4.3.2	GO:A0A078D3H7	EnsemblPlants:CDX83670	ProteinID:CDX83670
ProteinID:CDX83670.1	InterPro:Cyt_c-like_dom	InterPro:Cyt_c-like_dom_sf	InterPro:Cyt_c1	InterPro:Cyt_c1_TM_anchor_C	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0020037	GO:GO:0022900	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00139371001	InterPro:IPR009056
InterPro:IPR036909	PFAM:PF02167	PRINTS:PR00603	PFscan:PS51007	PANTHER:PTHR10266	PANTHER:PTHR10266:SF6
SUPFAM:SSF46626	SUPFAM:SSF81496	UniParc:UPI0004EE9A6A	SEG:seg	:	:

Description

BnaC07g24100D

Coordinates

chrLK031833:-:1518318..1521344

Molecular Weight (calculated)

40999.0 Da

IEP (calculated)

7.101

GRAVY (calculated)

-0.159

Length

372 amino acids

Sequence
(BLAST)

001: MRETNRLRMR RAEELSCVSS RCVIVELPFS LVPLFTSSSF PRSSPSPISS LHFPRVDLVH KASNQMVGGG VIQQILRRKL HSQSVATPVL SWFSSKKAHV
101: DADSSGVRAF ALLGAGVTGL LSFSTVASAD EAEHGLACPD YPWPHDGILS SYDHASIRRG HQVYQQVCAS CHSMSLISYR DLVGVAYTEE EAKAMAAEVE
201: VVDGPNDEGE MFTRPGKLSD RLPQPYANES AARFANGGAY PPDLSLITKA RHNGQNYVFA LLTGYRDPPA GISIREGLHY NPYFPGGAIA MPKMLNDEAV
301: EYEDGVPATE AQMGKDVVSF LSWAAEPEME ERKLMGFKWI FLLSLALLQA AYYRRLKWSV LKSRKLVLDV VN

Best Arabidopsis Sequence Match ( AT3G27240.1 )
(BLAST)

001: MVGGGVIQQI LRRKLHSQSL ATPVLSWFSS KKAHEDAGSS GVRALALLGA GVTGLLSFST VASADEAEHG LESPEYPWPH DGILSSYDHA SIRRGHQVYQ
101: QVCASCHSMS LISYRDLVGV AYTEEEAKAM AAEIEVVDGP NDEGEMFTRP GKLSDRFPQP YANESAARFA NGGAYPPDLS LITKARHNGP NYVFALLTGY
201: RDPPAGISIR EGLHYNPYFP GGAIAMPKML NDEAVEYEDG VPATEAQMGK DIVSFLAWAA EPEMEERKLM GFKWIFLLSL ALLQAAYYRR LKWSVLKSRK
301: LVLDVVN

Arabidopsis Description

CYC11Cytochrome c1 1, heme protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LK29]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.