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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039089.1-P Field mustard mitochondrion 84.34 100.0
CDY13693 Canola mitochondrion 81.87 97.07
CDY28482 Canola mitochondrion 80.49 95.44
CDY34168 Canola mitochondrion 80.49 95.44
AT3G27240.1 Thale cress mitochondrion 80.22 95.11
HORVU3Hr1G098650.1 Barley cytosol, peroxisome, plastid 51.65 94.47
Solyc02g093900.2.1 Tomato nucleus, plastid 67.31 91.08
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, mitochondrion, plastid 9.34 89.47
CDY00164 Canola endoplasmic reticulum 90.66 87.07
KXG25408 Sorghum mitochondrion 70.88 84.87
KRG94438 Soybean mitochondrion 71.43 84.69
Os05t0301700-01 Rice mitochondrion 70.33 84.21
KRH07017 Soybean mitochondrion 70.88 84.04
PGSC0003DMT400052104 Potato mitochondrion 71.15 83.55
Zm00001d049959_P001 Maize mitochondrion 70.33 83.39
TraesCS7A01G278100.1 Wheat golgi, unclear 69.51 83.22
TraesCS7B01G175500.1 Wheat mitochondrion 69.51 83.22
TraesCS7D01G277900.1 Wheat mitochondrion 69.51 83.22
VIT_14s0171g00330.t01 Wine grape mitochondrion 70.6 82.9
KRG94326 Soybean mitochondrion 69.51 82.41
CDX83670 Canola mitochondrion 84.07 82.26
Os01t0935700-02 Rice mitochondrion 68.68 82.24
HORVU7Hr1G058850.1 Barley mitochondrion 68.68 82.24
KRH57638 Soybean mitochondrion 69.51 82.14
TraesCS3D01G451000.1 Wheat mitochondrion 68.68 81.43
TraesCS3A01G458200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion 68.68 77.88
Zm00001d031967_P001 Maize cytosol, endoplasmic reticulum, peroxisome 69.23 68.85
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, vacuole 25.55 68.38
CDY36384 Canola plastid 34.07 60.78
GSMUA_AchrUn_... Banana cytosol, mitochondrion 18.13 58.41
GSMUA_Achr5P17710_001 Banana cytosol 34.34 51.02
Protein Annotations
Gene3D:1.10.760.10Gene3D:1.20.5.100MapMan:2.4.3.2GO:A0A078G5Z9UniProt:A0A078G5Z9EnsemblPlants:CDY20058
ProteinID:CDY20058ProteinID:CDY20058.1InterPro:Cyt_c-like_domInterPro:Cyt_c-like_dom_sfInterPro:Cyt_c1InterPro:Cyt_c1_TM_anchor_C
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0020037
GO:GO:0022900GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00009902001InterPro:IPR009056InterPro:IPR036909PFAM:PF02167
PRINTS:PR00603PFscan:PS51007PANTHER:PTHR10266PANTHER:PTHR10266:SF6SUPFAM:SSF46626SUPFAM:SSF81496
TMHMM:TMhelixUniParc:UPI0004EE3390SEG:seg:::
Description
BnaA09g01930DBnaA09g01930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G5Z9]
Coordinates
chrLK032102:+:654679..657510
Molecular Weight (calculated)
40536.6 Da
IEP (calculated)
8.412
GRAVY (calculated)
-0.141
Length
364 amino acids
Sequence
(BLAST)
001: MAISLTVESY RHKPAAVSSW NTHFLSFLYF FFVLDRLRRR SRHSIPRELI WYKALIKMVG GGVFQQILRR KLHSPSLATP VRSWLSSKTA HVEAGSSGVR
101: AFALLGAGVT GLLSFSTVAS ADEAEHGLAC PDYPWPHDGI LSSYDHASIR RGHQVYQQVC ASCHSMSLIS YRDLVGVAYT EEEAKAMAAE IEVVDGPNDE
201: GEMFTRPGKL SDRLPQPYAN ESAARFANGG AYPPDLSLIT KARHNGQNYV FALLTGYRDP PAGISIREGL HYNPYFPGGA IAMPKMLNDE AVEYEDGVPA
301: TEAQMGKDVV SFLSWAAEPE MEERKLMGFK WIFLLSLALL QAAYYRRLKW SVLKSRKLVL DVVN
Best Arabidopsis Sequence Match ( AT3G27240.1 )
(BLAST)
001: MVGGGVIQQI LRRKLHSQSL ATPVLSWFSS KKAHEDAGSS GVRALALLGA GVTGLLSFST VASADEAEHG LESPEYPWPH DGILSSYDHA SIRRGHQVYQ
101: QVCASCHSMS LISYRDLVGV AYTEEEAKAM AAEIEVVDGP NDEGEMFTRP GKLSDRFPQP YANESAARFA NGGAYPPDLS LITKARHNGP NYVFALLTGY
201: RDPPAGISIR EGLHYNPYFP GGAIAMPKML NDEAVEYEDG VPATEAQMGK DIVSFLAWAA EPEMEERKLM GFKWIFLLSL ALLQAAYYRR LKWSVLKSRK
301: LVLDVVN
Arabidopsis Description
CYC11Cytochrome c1 1, heme protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9LK29]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.