Factsheet for Bra000077.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, plasma membrane

Predictor Summary:

nucleus 4
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07716	Canola	cytosol	98.4	99.35
CDY62439	Canola	cytosol, nucleus, plasma membrane	98.08	98.71
AT2G38620.2	Thale cress	cytosol	91.99	92.28
Bra014835.1-P	Field mustard	cytosol	85.9	88.16
VIT_08s0056g00210.t01	Wine grape	cytosol	82.69	85.15
Solyc10g074720.1.1	Tomato	cytosol, nucleus	82.37	84.82
PGSC0003DMT400071215	Potato	cytosol	82.05	84.49
KRH47306	Soybean	cytosol, nucleus, plasma membrane	83.01	82.48
GSMUA_Achr11P...	Banana	cytosol	79.81	82.18
Os01t0897000-01	Rice	cytosol	79.49	81.85
TraesCS5D01G147100.1	Wheat	cytosol	77.56	79.61
TraesCS5B01G144100.2	Wheat	cytosol	77.56	79.61
TraesCS5A01G145500.1	Wheat	cytosol	76.6	78.62
EES15619	Sorghum	cytosol	76.92	77.92
TraesCS4D01G121200.2	Wheat	cytosol	74.36	75.08
TraesCS4B01G123100.1	Wheat	cytosol	74.36	75.08
TraesCS4A01G192300.1	Wheat	cytosol	74.36	75.08
Zm00001d044672_P005	Maize	cytosol	77.24	72.81
GSMUA_Achr4P02420_001	Banana	cytosol	56.09	72.61
HORVU5Hr1G046190.1	Barley	plastid	77.24	64.61
Bra015735.1-P	Field mustard	cytosol	63.78	63.58
Bra012258.1-P	Field mustard	cytosol	64.1	63.29
HORVU4Hr1G023490.7	Barley	endoplasmic reticulum, vacuole	74.04	60.95
Bra018036.1-P	Field mustard	cytosol	54.49	57.82
Bra029917.1-P	Field mustard	cytosol	54.17	54.17
Bra029230.1-P	Field mustard	cytosol, mitochondrion	38.14	36.28
Bra031013.1-P	Field mustard	cytosol	38.78	32.1
Bra015974.1-P	Field mustard	cytosol	40.38	31.74
Bra016572.1-P	Field mustard	cytosol	38.78	30.79
Bra037748.1-P	Field mustard	cytosol	40.38	26.92
Bra025077.1-P	Field mustard	cytosol	35.26	25.46
Bra038825.1-P	Field mustard	cytosol	33.65	24.25
Bra020977.1-P	Field mustard	cytosol	35.26	23.86
Bra019550.1-P	Field mustard	nucleus	38.78	21.72
Bra004236.1-P	Field mustard	nucleus	42.95	18.9
Bra017602.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	34.29	18.87
Bra021977.1-P	Field mustard	cytosol	21.15	18.59

Protein Annotations

Gene3D:1.10.510.10	MapMan:13.1.1.2.2	MapMan:18.4.3.1.2	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra000077	EnsemblPlants:Bra000077.1
EnsemblPlants:Bra000077.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0006259	GO:GO:0006464	GO:GO:0006468
GO:GO:0007049	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009791
GO:GO:0009987	GO:GO:0010444	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030154
GO:GO:0032875	GO:GO:1902806	GO:GO:2000037	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4C799
PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24056	PANTHER:PTHR24056:SF11
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002540104
SEG:seg	:	:	:	:	:

Description

AT2G38620 (E=3e-162) CDKB1;2 | CDKB1;2 (cyclin-dependent kinase B1;2); cyclin binding / kinase/ protein serine/threonine kinase

Coordinates

chrA03:+:9174189..9175410

Molecular Weight (calculated)

35611.1 Da

IEP (calculated)

8.003

GRAVY (calculated)

-0.288

Length

312 amino acids

Sequence
(BLAST)

001: MDKYEKLEKV GEGTYGKVYK AVEKDTGKLV ALKKTRLEMD EEGIPPTALR EISLLQMLSQ SIYIVRLLCV EHVLQSKDSS SSSSSQKSNL YLVFEYLDTD
101: LKKFVDSYRK GANPRPLEAD LVMRFMFQLC KGVAHCHSHG VLHRDLKPQN LLLDKEKGIL KIADLGLGRA FTVPLKSYTH EIVTLWYRAP EVLLGSTHYS
201: TGVDMWSVGC IFAEMIRRQA LFPGDSEFQQ LLHIFRLLGT PTEKQWPGVM TLRDWHVYPK WEPQDLSRAV PSLSPEGVDL LTNMLRYNPA ERISAKAALD
301: HPYFDSLDKS QF

Best Arabidopsis Sequence Match ( AT2G38620.2 )
(BLAST)

001: MEKYEKLEKV GEGTYGKVYK AMEKTTGKLV ALKKTRLEMD EEGIPPTALR EISLLQMLSQ SIYIVRLLCV EHVIQSKDST VSHSPKSNLY LVFEYLDTDL
101: KKFIDSHRKG SNPRPLEASL VQRFMFQLFK GVAHCHSHGV LHRDLKPQNL LLDKDKGILK IADLGLSRAF TVPLKAYTHE IVTLWYRAPE VLLGSTHYST
201: AVDIWSVGCI FAEMIRRQAL FPGDSEFQQL LHIFRLLGTP TEQQWPGVMA LRDWHVYPKW EPQDLSRAVP SLSPEGIDLL TQMLKYNPAE RISAKAALDH
301: PYFDSLDKSQ F

Arabidopsis Description

CDKB1-2Cyclin-dependent kinase B1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q2V419]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.