Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400068627 | Potato | nucleus | 73.91 | 44.16 |
| Solyc02g064900.1.1 | Tomato | nucleus | 82.07 | 43.64 |
| PGSC0003DMT400064307 | Potato | nucleus | 68.48 | 34.71 |
| PGSC0003DMT400031329 | Potato | nucleus | 55.43 | 31.68 |
| Solyc02g064860.1.1 | Tomato | nucleus | 39.13 | 30.64 |
| Solyc02g064910.1.1 | Tomato | nucleus | 38.04 | 29.79 |
| KRH77050 | Soybean | nucleus, plastid | 46.2 | 25.45 |
| KRH28424 | Soybean | nucleus | 45.11 | 24.78 |
| PGSC0003DMT400068629 | Potato | cytosol | 32.07 | 24.58 |
| PGSC0003DMT400039904 | Potato | nucleus | 42.39 | 24.22 |
| PGSC0003DMT400020648 | Potato | nucleus | 41.3 | 22.89 |
| PGSC0003DMT400066557 | Potato | nucleus | 42.93 | 22.07 |
| KRH04529 | Soybean | nucleus | 44.02 | 21.83 |
| KRH57973 | Soybean | nucleus | 44.57 | 21.41 |
| AT3G50070.1 | Thale cress | nucleus | 41.85 | 21.33 |
| CDX68573 | Canola | nucleus | 39.13 | 20.45 |
| CDY12825 | Canola | nucleus | 39.67 | 20.39 |
| Bra029992.1-P | Field mustard | nucleus | 38.59 | 20.17 |
| CDX83112 | Canola | nucleus | 38.59 | 20.17 |
| CDY01425 | Canola | nucleus | 38.59 | 20.06 |
| Bra036051.1-P | Field mustard | nucleus | 37.5 | 19.55 |
| Bra012146.1-P | Field mustard | nucleus | 37.5 | 19.49 |
| CDY30607 | Canola | nucleus | 36.96 | 19.26 |
| CDY23022 | Canola | nucleus | 34.24 | 19.15 |
| Bra012909.1-P | Field mustard | nucleus | 33.7 | 18.9 |
| CDY02095 | Canola | nucleus | 33.7 | 18.9 |
| AT5G67260.2 | Thale cress | nucleus | 41.3 | 18.81 |
| CDY17742 | Canola | nucleus | 35.87 | 18.59 |
| PGSC0003DMT400033588 | Potato | nucleus | 29.35 | 15.17 |
| PGSC0003DMT400088718 | Potato | nucleus | 25.54 | 15.16 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 30.98 | 14.69 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 27.72 | 14.41 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 27.17 | 14.12 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 27.17 | 14.12 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 26.63 | 13.96 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 27.17 | 13.81 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 25.0 | 13.33 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 29.35 | 13.27 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 28.8 | 13.02 |
| PGSC0003DMT400037827 | Potato | nucleus | 23.91 | 12.79 |
| Os09t0111100-01 | Rice | cytosol | 24.46 | 12.36 |
| Zm00001d019696_P001 | Maize | cytosol | 25.54 | 12.14 |
| EER96424 | Sorghum | cytosol | 24.46 | 11.78 |
| Zm00001d005293_P001 | Maize | cytosol | 25.0 | 11.76 |
| PGSC0003DMT400041637 | Potato | nucleus | 24.46 | 11.42 |
| PGSC0003DMT400057686 | Potato | cytosol, nucleus, plasma membrane | 18.48 | 11.33 |
| PGSC0003DMT400039033 | Potato | nucleus | 19.02 | 11.25 |
| PGSC0003DMT400012934 | Potato | nucleus | 17.93 | 10.89 |
| PGSC0003DMT400040287 | Potato | nucleus | 19.57 | 10.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.85 | 9.78 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 1.63 | 1.74 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400011487 | EnsemblPlantsGene:PGSC0003DMG400004511 | Gene3D:1.10.472.10 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF242 | PFAM:PF02984 |
| PGSC:PGSC0003DMG400004511 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI00029577C8 | UniProt:M0ZZM3 | MapMan:35.1 |
Description
Cyclin D3.2 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004511]
Coordinates
chr2:-:23253297..23255250
Molecular Weight (calculated)
20766.4 Da
IEP (calculated)
7.301
GRAVY (calculated)
0.024
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSNPKYVFE AKTIQKIELL VLSTLKWKMN PVTPLSFIDH IIKRFGLMTN LCSEFQGKCE NIILGIITDS RLLHYPPSVI ATVTLFYVIN EIEPCNAVDY
101: LNQFMVVLKV RKDSIDECHD LILELMGISG SKIYQTQTRK CQSIPGSPDG VIDAYFRCES SNDSLAVAPS VSSLPEPQYK RSRT
101: LNQFMVVLKV RKDSIDECHD LILELMGISG SKIYQTQTRK CQSIPGSPDG VIDAYFRCES SNDSLAVAPS VSSLPEPQYK RSRT
001: MALEKEEEAS QNGAFCVLDG LYCEEETGFV EDDLDDDGDL DFLEKSDESV VKFQFLPLLD MFLWDDDEIL SLISKENETN PCFGEQILDG FLVSCRKEAL
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRKDF ETRQRVVQVL VLFLSLKMKK IWWTYMYIEG WIQRQQQLRL
401: ERRR
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRKDF ETRQRVVQVL VLFLSLKMKK IWWTYMYIEG WIQRQQQLRL
401: ERRR
Arabidopsis Description
CYCD3;2CYCLIN D3;2 [Source:TAIR;Acc:AT5G67260]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.