Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc12g088650.1.1 | Tomato | nucleus | 93.79 | 92.92 |
PGSC0003DMT400020648 | Potato | nucleus | 67.08 | 65.06 |
VIT_18s0001g09920.t01 | Wine grape | nucleus | 59.32 | 51.34 |
KRH61348 | Soybean | nucleus | 53.42 | 49.28 |
KRH52038 | Soybean | nucleus | 54.04 | 48.07 |
PGSC0003DMT400066557 | Potato | nucleus | 53.42 | 48.04 |
PGSC0003DMT400064307 | Potato | nucleus | 48.14 | 42.7 |
PGSC0003DMT400011487 | Potato | nucleus | 24.22 | 42.39 |
PGSC0003DMT400031329 | Potato | nucleus | 41.93 | 41.93 |
PGSC0003DMT400068629 | Potato | cytosol | 29.19 | 39.17 |
PGSC0003DMT400068627 | Potato | nucleus | 36.96 | 38.64 |
GSMUA_Achr2P05260_001 | Banana | nucleus | 35.4 | 33.04 |
GSMUA_Achr4P20220_001 | Banana | nucleus | 36.34 | 32.32 |
TraesCS5B01G158400.1 | Wheat | cytosol | 35.4 | 32.2 |
GSMUA_Achr1P09780_001 | Banana | cytosol | 38.51 | 31.96 |
TraesCS5A01G161000.1 | Wheat | cytosol | 34.78 | 31.64 |
TraesCS5D01G165900.1 | Wheat | cytosol | 34.78 | 31.64 |
HORVU5Hr1G050270.8 | Barley | cytosol | 34.47 | 31.62 |
GSMUA_Achr3P13140_001 | Banana | nucleus | 39.44 | 31.2 |
PGSC0003DMT400033588 | Potato | nucleus | 33.54 | 30.34 |
PGSC0003DMT400040287 | Potato | nucleus | 31.06 | 29.76 |
GSMUA_Achr3P01010_001 | Banana | nucleus | 36.65 | 28.99 |
PGSC0003DMT400088718 | Potato | nucleus | 27.64 | 28.71 |
PGSC0003DMT400037827 | Potato | nucleus | 30.12 | 28.2 |
Zm00001d019696_P001 | Maize | cytosol | 33.85 | 28.17 |
GSMUA_AchrUn_... | Banana | cytosol | 27.64 | 28.08 |
Os09t0111100-01 | Rice | cytosol | 31.68 | 28.02 |
EER96424 | Sorghum | cytosol | 32.92 | 27.75 |
Zm00001d005293_P001 | Maize | cytosol | 33.54 | 27.62 |
PGSC0003DMT400041637 | Potato | nucleus | 29.19 | 23.86 |
PGSC0003DMT400057686 | Potato | cytosol, nucleus, plasma membrane | 21.12 | 22.67 |
PGSC0003DMT400039033 | Potato | nucleus | 21.43 | 22.19 |
PGSC0003DMT400012934 | Potato | nucleus | 19.57 | 20.79 |
Protein Annotations
Gene3D:1.10.472.10 | EntrezGene:102583812 | MapMan:13.1.1.1.4 | ncoils:Coil | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
UniProt:M1B8Y2 | PFAM:PF00134 | PFAM:PF02984 | EnsemblPlantsGene:PGSC0003DMG401015433 | PGSC:PGSC0003DMG401015433 | EnsemblPlants:PGSC0003DMT400039904 |
PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF342 | SMART:SM00385 | SMART:SM01332 |
SUPFAM:SSF47954 | UniParc:UPI000295D050 | RefSeq:XP_006342647.1 | SEG:seg | : | : |
Description
CycD3;3 protein [Source:PGSC_GENE;Acc:PGSC0003DMG401015433]
Coordinates
chr12:-:56465450..56468316
Molecular Weight (calculated)
36880.2 Da
IEP (calculated)
4.625
GRAVY (calculated)
-0.119
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFVLDSLYC KDETFQVFEV KPKSVSLLNQ DLIWEKEELE SLLSKEEENQ MYNVVINNPF LSVFRKEAIE WILEGVDYHN FSAQTAILAV NYLDRFLFSV
101: QSQSEKQPWM NQLAAVTCLS LAAKIEETQV PLLLDLQVEE SRYFFEPKTI QRMEILVLST LKWKMNPVTP FSFLDYFSRR LGLNDHICFE LLRRCEWVLL
201: STITDCRFMC YLPSAMAAAT MLHVIDKLEP CTGQEYQEQL LGILGIVKDN VTDCYKLVQE VASNIDFNSH KRKFGALPGS PIGVMDVSFS SDSSNDSWAV
301: AASVSSSPEP SSKKTRTHEQ EK
101: QSQSEKQPWM NQLAAVTCLS LAAKIEETQV PLLLDLQVEE SRYFFEPKTI QRMEILVLST LKWKMNPVTP FSFLDYFSRR LGLNDHICFE LLRRCEWVLL
201: STITDCRFMC YLPSAMAAAT MLHVIDKLEP CTGQEYQEQL LGILGIVKDN VTDCYKLVQE VASNIDFNSH KRKFGALPGS PIGVMDVSFS SDSSNDSWAV
301: AASVSSSPEP SSKKTRTHEQ EK
001: MALEKEEEAS QNGAFCVLDG LYCEEETGFV EDDLDDDGDL DFLEKSDESV VKFQFLPLLD MFLWDDDEIL SLISKENETN PCFGEQILDG FLVSCRKEAL
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRKDF ETRQRVVQVL VLFLSLKMKK IWWTYMYIEG WIQRQQQLRL
401: ERRR
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRKDF ETRQRVVQVL VLFLSLKMKK IWWTYMYIEG WIQRQQQLRL
401: ERRR
Arabidopsis Description
CYCD3;2CYCLIN D3;2 [Source:TAIR;Acc:AT5G67260]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.