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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g088650.1.1 Tomato nucleus 93.79 92.92
PGSC0003DMT400020648 Potato nucleus 67.08 65.06
VIT_18s0001g09920.t01 Wine grape nucleus 59.32 51.34
KRH61348 Soybean nucleus 53.42 49.28
KRH52038 Soybean nucleus 54.04 48.07
PGSC0003DMT400066557 Potato nucleus 53.42 48.04
PGSC0003DMT400064307 Potato nucleus 48.14 42.7
PGSC0003DMT400011487 Potato nucleus 24.22 42.39
PGSC0003DMT400031329 Potato nucleus 41.93 41.93
PGSC0003DMT400068629 Potato cytosol 29.19 39.17
PGSC0003DMT400068627 Potato nucleus 36.96 38.64
GSMUA_Achr2P05260_001 Banana nucleus 35.4 33.04
GSMUA_Achr4P20220_001 Banana nucleus 36.34 32.32
TraesCS5B01G158400.1 Wheat cytosol 35.4 32.2
GSMUA_Achr1P09780_001 Banana cytosol 38.51 31.96
TraesCS5A01G161000.1 Wheat cytosol 34.78 31.64
TraesCS5D01G165900.1 Wheat cytosol 34.78 31.64
HORVU5Hr1G050270.8 Barley cytosol 34.47 31.62
GSMUA_Achr3P13140_001 Banana nucleus 39.44 31.2
PGSC0003DMT400033588 Potato nucleus 33.54 30.34
PGSC0003DMT400040287 Potato nucleus 31.06 29.76
GSMUA_Achr3P01010_001 Banana nucleus 36.65 28.99
PGSC0003DMT400088718 Potato nucleus 27.64 28.71
PGSC0003DMT400037827 Potato nucleus 30.12 28.2
Zm00001d019696_P001 Maize cytosol 33.85 28.17
GSMUA_AchrUn_... Banana cytosol 27.64 28.08
Os09t0111100-01 Rice cytosol 31.68 28.02
EER96424 Sorghum cytosol 32.92 27.75
Zm00001d005293_P001 Maize cytosol 33.54 27.62
PGSC0003DMT400041637 Potato nucleus 29.19 23.86
PGSC0003DMT400057686 Potato cytosol, nucleus, plasma membrane 21.12 22.67
PGSC0003DMT400039033 Potato nucleus 21.43 22.19
PGSC0003DMT400012934 Potato nucleus 19.57 20.79
Protein Annotations
Gene3D:1.10.472.10EntrezGene:102583812MapMan:13.1.1.1.4ncoils:CoilInterPro:Cyclin-likeInterPro:Cyclin-like_sf
InterPro:Cyclin_C-domInterPro:Cyclin_NGO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
UniProt:M1B8Y2PFAM:PF00134PFAM:PF02984EnsemblPlantsGene:PGSC0003DMG401015433PGSC:PGSC0003DMG401015433EnsemblPlants:PGSC0003DMT400039904
PIRSF:PIRSF001771ScanProsite:PS00292PANTHER:PTHR10177PANTHER:PTHR10177:SF342SMART:SM00385SMART:SM01332
SUPFAM:SSF47954UniParc:UPI000295D050RefSeq:XP_006342647.1SEG:seg::
Description
CycD3;3 protein [Source:PGSC_GENE;Acc:PGSC0003DMG401015433]
Coordinates
chr12:-:56465450..56468316
Molecular Weight (calculated)
36880.2 Da
IEP (calculated)
4.625
GRAVY (calculated)
-0.119
Length
322 amino acids
Sequence
(BLAST)
001: MAFVLDSLYC KDETFQVFEV KPKSVSLLNQ DLIWEKEELE SLLSKEEENQ MYNVVINNPF LSVFRKEAIE WILEGVDYHN FSAQTAILAV NYLDRFLFSV
101: QSQSEKQPWM NQLAAVTCLS LAAKIEETQV PLLLDLQVEE SRYFFEPKTI QRMEILVLST LKWKMNPVTP FSFLDYFSRR LGLNDHICFE LLRRCEWVLL
201: STITDCRFMC YLPSAMAAAT MLHVIDKLEP CTGQEYQEQL LGILGIVKDN VTDCYKLVQE VASNIDFNSH KRKFGALPGS PIGVMDVSFS SDSSNDSWAV
301: AASVSSSPEP SSKKTRTHEQ EK
Best Arabidopsis Sequence Match ( AT5G67260.2 )
(BLAST)
001: MALEKEEEAS QNGAFCVLDG LYCEEETGFV EDDLDDDGDL DFLEKSDESV VKFQFLPLLD MFLWDDDEIL SLISKENETN PCFGEQILDG FLVSCRKEAL
101: DWVLRVKSHY GFTSLTAILA VNYFDRFMTS IKLQTDKPWM SQLVAVASLS LAAKVEEIQV PLLLDLQVEE ARYLFEAKTI QRMELLILST LQWRMHPVTP
201: ISFFDHIIRR FGSKWHQQLD FCRKCERLLI SVIADTRFMR YFPSVLATAI MILVFEELKP CDEVEYQSQI TTLLKVNQEK VNECYELLLE HNPSKKRMMN
301: LVDQDSPSGV LDFDDSSNSS WNVSTTASVS SSSSSPEPLL KRRRVQEQQM RLPSINRKDF ETRQRVVQVL VLFLSLKMKK IWWTYMYIEG WIQRQQQLRL
401: ERRR
Arabidopsis Description
CYCD3;2CYCLIN D3;2 [Source:TAIR;Acc:AT5G67260]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.