Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61348 | Soybean | nucleus | 78.45 | 81.38 |
| KRH05626 | Soybean | cytosol | 32.6 | 54.88 |
| VIT_18s0001g09920.t01 | Wine grape | nucleus | 56.35 | 54.84 |
| PGSC0003DMT400039904 | Potato | nucleus | 48.07 | 54.04 |
| Solyc12g088650.1.1 | Tomato | nucleus | 47.51 | 52.92 |
| PGSC0003DMT400020648 | Potato | nucleus | 46.96 | 51.2 |
| KRH15412 | Soybean | cytosol | 38.12 | 51.11 |
| Solyc04g078470.2.1 | Tomato | nucleus | 46.69 | 50.3 |
| KRH04529 | Soybean | nucleus | 48.9 | 47.71 |
| KRH57973 | Soybean | nucleus | 47.79 | 45.17 |
| KRH77050 | Soybean | nucleus, plastid | 41.44 | 44.91 |
| KRH28424 | Soybean | nucleus | 40.88 | 44.18 |
| KRG90996 | Soybean | nucleus | 47.24 | 43.51 |
| KRH35760 | Soybean | nucleus | 47.51 | 42.79 |
| KRH69654 | Soybean | cytosol | 23.2 | 34.57 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 30.66 | 32.17 |
| KRH35652 | Soybean | nucleus | 26.8 | 32.12 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 33.98 | 31.7 |
| KRH69476 | Soybean | nucleus | 29.28 | 31.27 |
| KRH16827 | Soybean | nucleus | 30.39 | 30.99 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 30.94 | 30.94 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 34.53 | 30.71 |
| KRH45568 | Soybean | nucleus | 29.28 | 30.64 |
| KRH62196 | Soybean | nucleus | 29.56 | 30.4 |
| KRH72435 | Soybean | nucleus | 29.83 | 30.25 |
| KRH74510 | Soybean | nucleus | 30.11 | 30.19 |
| KRH58137 | Soybean | nucleus | 26.52 | 30.19 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.24 | 29.97 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 29.28 | 29.94 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 29.28 | 29.94 |
| KRG99448 | Soybean | nucleus | 29.56 | 29.89 |
| KRH52917 | Soybean | nucleus | 29.01 | 29.83 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 29.01 | 29.66 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 28.73 | 29.63 |
| KRG91131 | Soybean | nucleus | 26.24 | 29.32 |
| KRH61407 | Soybean | nucleus | 24.86 | 28.85 |
| Os09t0111100-01 | Rice | cytosol | 29.01 | 28.85 |
| KRG99255 | Soybean | nucleus | 27.62 | 28.74 |
| KRH04404 | Soybean | vacuole | 26.8 | 28.53 |
| KRH45743 | Soybean | nucleus | 27.9 | 28.06 |
| Zm00001d019696_P001 | Maize | cytosol | 29.01 | 27.13 |
| Zm00001d005293_P001 | Maize | cytosol | 29.28 | 27.11 |
| KRH52092 | Soybean | nucleus | 23.48 | 27.07 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 30.39 | 27.03 |
| KRH54628 | Soybean | cytosol | 11.33 | 26.8 |
| KRH54622 | Soybean | cytosol | 11.33 | 26.8 |
| KRH74675 | Soybean | nucleus, plastid | 28.18 | 26.7 |
| EER96424 | Sorghum | cytosol | 27.9 | 26.44 |
| KRH65892 | Soybean | cytosol | 20.72 | 26.04 |
| KRH75669 | Soybean | cytosol | 20.44 | 25.61 |
| KRH77118 | Soybean | nucleus | 23.48 | 25.6 |
| KRH28363 | Soybean | nucleus | 22.65 | 24.77 |
| KRH10729 | Soybean | nucleus | 17.4 | 23.16 |
| KRH21593 | Soybean | nucleus | 16.85 | 22.43 |
| KRH22479 | Soybean | cytosol | 19.06 | 21.84 |
| KRH26876 | Soybean | nucleus | 18.78 | 21.59 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 19.61 | 21.58 |
| KRH25470 | Soybean | nucleus | 19.06 | 21.3 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100795892 | MapMan:13.1.1.1.4 | EMBL:ACUP02003403 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_06G042900 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:K7KT16 | EnsemblPlants:KRH52038 | ProteinID:KRH52038 | ProteinID:KRH52038.1 | PFAM:PF00134 |
| PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF216 | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0001CA9206 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:+:3264037..3266176
Molecular Weight (calculated)
41127.9 Da
IEP (calculated)
5.735
GRAVY (calculated)
-0.346
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYHHHDHTN RKSLLDTLYC SEAEEDYGHF LNNSSPASPP FLLQSDMFSD EQELTSLLGK EHHNPLSTCL QTNPALDFAR REAVEWMLKV NSHYSFSALT
101: AVLSVNYFDR FLFSFRFQND KPWMVQLAAV ACLSIAAKVE ETHVPFLIDL QQVDESRYLF EAKTIKKMEI LVLSTLGWKM NPPTPLSFLD YFTRRLGSKD
201: HLCWEFLSKS QGVLLSLLGD SRFMSYLPSV LATATMMHVV KSVEPGLEAE YKSQLFGILR IDKEKPEKVN SCCKLLLEVW SGYEEEEQEQ GKQCMKRKFG
301: IGSIPGSPNG VMDVSFSCDS SSNDSSVSSS PEPLSKKSRS EEQEQLLLPN PNHSNSDFLH RL
101: AVLSVNYFDR FLFSFRFQND KPWMVQLAAV ACLSIAAKVE ETHVPFLIDL QQVDESRYLF EAKTIKKMEI LVLSTLGWKM NPPTPLSFLD YFTRRLGSKD
201: HLCWEFLSKS QGVLLSLLGD SRFMSYLPSV LATATMMHVV KSVEPGLEAE YKSQLFGILR IDKEKPEKVN SCCKLLLEVW SGYEEEEQEQ GKQCMKRKFG
301: IGSIPGSPNG VMDVSFSCDS SSNDSSVSSS PEPLSKKSRS EEQEQLLLPN PNHSNSDFLH RL
001: MALEEEEESQ NAPFCVLDGL FCEEESEFHE QVDLCDESVE KFPFLNLGLS DHDMLWDDDE LSTLISKQEP CLYDEILDDE FLVLCREKAL DWIFKVKSHY
101: GFNSLTALLA VNYFDRFITS RKFQTDKPWM SQLTALACLS LAAKVEEIRV PFLLDFQVEE ARYVFEAKTI QRMELLVLST LDWRMHPVTP ISFFDHIIRR
201: YSFKSHHQLE FLSRCESLLL SIIPDSRFLS FSPSVLATAI MVSVIRDLKM CDEAVYQSQL MTLLKVDSEK VNKCYELVLD HSPSKKRMMN WMQQPASPIG
301: VFDASFSSDS SNESWVVSAS ASVSSSPSSE PLLKRRRVQE QQMRLSSINR MFFDVLSSSP R
101: GFNSLTALLA VNYFDRFITS RKFQTDKPWM SQLTALACLS LAAKVEEIRV PFLLDFQVEE ARYVFEAKTI QRMELLVLST LDWRMHPVTP ISFFDHIIRR
201: YSFKSHHQLE FLSRCESLLL SIIPDSRFLS FSPSVLATAI MVSVIRDLKM CDEAVYQSQL MTLLKVDSEK VNKCYELVLD HSPSKKRMMN WMQQPASPIG
301: VFDASFSSDS SNESWVVSAS ASVSSSPSSE PLLKRRRVQE QQMRLSSINR MFFDVLSSSP R
Arabidopsis Description
CYCD3-3CYCD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VE15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.