Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35760 | Soybean | nucleus | 92.62 | 90.55 |
| VIT_07s0129g01100.t01 | Wine grape | nucleus | 50.64 | 64.4 |
| VIT_03s0180g00040.t01 | Wine grape | nucleus | 62.34 | 63.47 |
| Solyc01g107730.2.1 | Tomato | nucleus | 56.74 | 61.26 |
| PGSC0003DMT400066557 | Potato | nucleus | 55.73 | 61.17 |
| CDX76265 | Canola | nucleus | 51.65 | 55.62 |
| CDY57741 | Canola | nucleus | 51.15 | 55.07 |
| CDY49278 | Canola | nucleus | 51.65 | 55.01 |
| Bra017629.1-P | Field mustard | nucleus | 51.4 | 54.89 |
| Bra034612.1-P | Field mustard | nucleus | 51.4 | 54.89 |
| CDX72453 | Canola | nucleus | 50.13 | 54.72 |
| Bra011501.1-P | Field mustard | nucleus | 51.65 | 54.42 |
| CDY69708 | Canola | nucleus | 51.4 | 54.01 |
| AT4G34160.1 | Thale cress | nucleus | 51.65 | 53.99 |
| CDX75405 | Canola | nucleus | 51.15 | 53.89 |
| KRH04529 | Soybean | nucleus | 47.84 | 50.67 |
| KRH28424 | Soybean | nucleus | 42.75 | 50.15 |
| KRH61348 | Soybean | nucleus | 44.27 | 49.86 |
| KRH77050 | Soybean | nucleus, plastid | 41.48 | 48.8 |
| KRH57973 | Soybean | nucleus | 47.07 | 48.3 |
| KRH15412 | Soybean | cytosol | 33.08 | 48.15 |
| KRH05626 | Soybean | cytosol | 26.21 | 47.91 |
| KRH52038 | Soybean | nucleus | 43.51 | 47.24 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 33.33 | 33.76 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 30.28 | 32.87 |
| KRH69654 | Soybean | cytosol | 20.1 | 32.51 |
| KRH35652 | Soybean | nucleus | 24.94 | 32.45 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 28.75 | 32.19 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 33.33 | 32.19 |
| GSMUA_AchrUn_... | Banana | cytosol | 25.95 | 32.18 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 28.24 | 32.17 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 28.5 | 31.64 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 28.5 | 31.64 |
| KRH69476 | Soybean | nucleus | 27.23 | 31.56 |
| KRH58137 | Soybean | nucleus | 25.45 | 31.45 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 28.24 | 31.36 |
| Os09t0111100-01 | Rice | cytosol | 28.5 | 30.77 |
| KRH16827 | Soybean | nucleus | 27.74 | 30.7 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 31.3 | 30.22 |
| KRH52917 | Soybean | nucleus | 26.97 | 30.11 |
| KRH62196 | Soybean | nucleus | 26.97 | 30.11 |
| KRH72435 | Soybean | nucleus | 27.23 | 29.97 |
| KRG91131 | Soybean | nucleus | 24.68 | 29.94 |
| KRG99448 | Soybean | nucleus | 27.23 | 29.89 |
| KRG99255 | Soybean | nucleus | 26.46 | 29.89 |
| KRH45568 | Soybean | nucleus | 26.21 | 29.77 |
| KRH45743 | Soybean | nucleus | 26.97 | 29.44 |
| KRH61407 | Soybean | nucleus | 23.16 | 29.17 |
| KRH04404 | Soybean | vacuole | 24.94 | 28.82 |
| KRH74510 | Soybean | nucleus | 26.46 | 28.81 |
| Zm00001d019696_P001 | Maize | cytosol | 27.99 | 28.42 |
| KRH52092 | Soybean | nucleus | 22.65 | 28.34 |
| Zm00001d005293_P001 | Maize | cytosol | 27.99 | 28.13 |
| EER96424 | Sorghum | cytosol | 26.97 | 27.75 |
| KRH77118 | Soybean | nucleus | 22.9 | 27.11 |
| KRH74675 | Soybean | nucleus, plastid | 26.21 | 26.96 |
| KRH28363 | Soybean | nucleus | 21.88 | 25.98 |
| KRH25470 | Soybean | nucleus | 21.12 | 25.62 |
| KRH22479 | Soybean | cytosol | 20.36 | 25.32 |
| KRH56054 | Soybean | cytosol, nucleus, plasma membrane | 21.12 | 25.23 |
| KRH26876 | Soybean | nucleus | 20.1 | 25.08 |
| KRH10729 | Soybean | nucleus | 16.79 | 24.26 |
| KRH21593 | Soybean | nucleus | 16.54 | 23.9 |
| KRH65892 | Soybean | cytosol | 16.79 | 22.92 |
| KRH75669 | Soybean | cytosol | 16.29 | 22.15 |
| KRH54628 | Soybean | cytosol | 8.14 | 20.91 |
| KRH54622 | Soybean | cytosol | 8.14 | 20.91 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | EntrezGene:547740 | EMBL:ACUP02012657 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_C-dom | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_20G126700 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:I1NFV7 | EnsemblPlants:KRG90996 | ProteinID:KRG90996 | ProteinID:KRG90996.1 | PFAM:PF00134 |
| PFAM:PF02984 | ScanProsite:PS00292 | PANTHER:PTHR10177 | PANTHER:PTHR10177:SF351 | SMART:SM00385 | SMART:SM01332 |
| SUPFAM:SSF47954 | UniParc:UPI00023DC375 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:36883135..36885861
Molecular Weight (calculated)
44901.1 Da
IEP (calculated)
4.797
GRAVY (calculated)
-0.382
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIQHHNEQL EHNENVSSVL DALYCDEGKW EDEEEEEEDN EESEVTTNTG TSLFPLLMLE QDLFWEDEEL NSLFSKEKVQ HEEAYDYNNL NSDDNSNDNN
101: NNNNNVLLDS CLSQPRREAV EWILKVNAHY GFSALTATLA VTYLDRFLLS FHFQREKPWM IQLVAVTCIS LAAKVEETQV PLLLDLQVQD TKYVFEAKTI
201: QRMELLVLST LKWKMHPVTP LSFLDHIIRR LGLKTHLHWE FLRRCEHLLL SVLLDSRFVG CLPSVLATAT MLHVIDQIKH NGGMEYKNQL LSVLKISKEK
301: VDECYNAILQ LSNVNNYGHN NNTSKRKYEQ IPSSPSGVID AAFCSDGSND SWAVGSSLYS PPEPLFKKSR TQGQQMKLSP LNRVIVGIVG TSP
101: NNNNNVLLDS CLSQPRREAV EWILKVNAHY GFSALTATLA VTYLDRFLLS FHFQREKPWM IQLVAVTCIS LAAKVEETQV PLLLDLQVQD TKYVFEAKTI
201: QRMELLVLST LKWKMHPVTP LSFLDHIIRR LGLKTHLHWE FLRRCEHLLL SVLLDSRFVG CLPSVLATAT MLHVIDQIKH NGGMEYKNQL LSVLKISKEK
301: VDECYNAILQ LSNVNNYGHN NNTSKRKYEQ IPSSPSGVID AAFCSDGSND SWAVGSSLYS PPEPLFKKSR TQGQQMKLSP LNRVIVGIVG TSP
001: MAIRKEEESR EEQSNSFLLD ALYCEEEKWD DEGEEVEENS SLSSSSSPFV VLQQDLFWED EDLVTLFSKE EEQGLSCLDD VYLSTDRKEA VGWILRVNAH
101: YGFSTLAAVL AITYLDKFIC SYSLQRDKPW MLQLVSVACL SLAAKVEETQ VPLLLDFQVE ETKYVFEAKT IQRMELLILS TLEWKMHLIT PISFVDHIIR
201: RLGLKNNAHW DFLNKCHRLL LSVISDSRFV GYLPSVVAAA TMMRIIEQVD PFDPLSYQTN LLGVLNLTKE KVKTCYDLIL QLPVDRIGLQ IQIQSSKKRK
301: SHDSSSSLNS PSCVIDANPF NSDESSNDSW SASSCNPPTS SSSPQQQPPL KKMRGAEENE KKKPILHLPW AIVATP
101: YGFSTLAAVL AITYLDKFIC SYSLQRDKPW MLQLVSVACL SLAAKVEETQ VPLLLDFQVE ETKYVFEAKT IQRMELLILS TLEWKMHLIT PISFVDHIIR
201: RLGLKNNAHW DFLNKCHRLL LSVISDSRFV GYLPSVVAAA TMMRIIEQVD PFDPLSYQTN LLGVLNLTKE KVKTCYDLIL QLPVDRIGLQ IQIQSSKKRK
301: SHDSSSSLNS PSCVIDANPF NSDESSNDSW SASSCNPPTS SSSPQQQPPL KKMRGAEENE KKKPILHLPW AIVATP
Arabidopsis Description
CYCD3-1Cyclin-D3-1 [Source:UniProtKB/Swiss-Prot;Acc:P42753]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.