Factsheet for PGSC0003DMT400008515

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
golgi 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	golgi, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	golgi, nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g096700.2.1	Tomato	nucleus	90.92	96.89
KRH26350	Soybean	nucleus	71.08	72.64
KRH44087	Soybean	nucleus	70.77	72.21
VIT_01s0011g00790.t01	Wine grape	nucleus	70.92	71.03
Bra034841.1-P	Field mustard	nucleus	64.0	65.0
AT3G11450.1	Thale cress	nucleus	64.46	64.76
CDY08525	Canola	nucleus	63.69	64.69
CDY56850	Canola	nucleus	63.38	64.27
Zm00001d004033_P001	Maize	nucleus	63.85	63.55
Zm00001d004025_P001	Maize	nucleus	63.54	63.25
OQU92158	Sorghum	nucleus	63.54	63.15
KXG26091	Sorghum	nucleus	63.38	63.09
GSMUA_Achr2P05590_001	Banana	nucleus	56.46	62.52
HORVU1Hr1G091820.1	Barley	nucleus	63.85	62.22
TraesCS1A01G420500.1	Wheat	cytosol	62.15	61.03
TraesCS1B01G451500.1	Wheat	cytosol	61.69	60.57
CDY11348	Canola	nucleus	22.46	60.33
Bra005877.1-P	Field mustard	nucleus, plastid	42.31	60.04
TraesCS1D01G428400.1	Wheat	nucleus	61.85	59.82
AT5G06110.1	Thale cress	nucleus	60.77	59.58
CDX80982	Canola	nucleus	38.31	59.0
CDX73875	Canola	nucleus	56.0	58.15
Bra005875.1-P	Field mustard	nucleus	41.85	57.14
Zm00001d047099_P001	Maize	nucleus	29.85	56.89
CDY11351	Canola	nucleus	32.77	56.8
CDX80983	Canola	nucleus	33.08	56.43
Bra001404.1-P	Field mustard	nucleus	55.23	55.83
CDY53316	Canola	nucleus	56.15	55.73
Bra008278.1-P	Field mustard	nucleus	17.38	49.78
Os04t0377932-00	Rice	nucleus	20.31	49.62
CDY11583	Canola	plastid	20.77	44.26
Zm00001d047097_P001	Maize	nucleus	25.69	42.28
PGSC0003DMT400062221	Potato	nucleus	12.0	24.45

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.287.110	EntrezGene:102591551	MapMan:15.5.2.2	MapMan:19.1.2.3	ncoils:Coil
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:Homeobox-like_sf	InterPro:IPR001623
InterPro:IPR017877	InterPro:IPR017884	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0ZUP2	InterPro:Myb-like_dom
PFAM:PF00226	PFAM:PF00249	EnsemblPlantsGene:PGSC0003DMG400003295	PGSC:PGSC0003DMG400003295	EnsemblPlants:PGSC0003DMT400008515	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PFscan:PS50090	PFscan:PS51293	PANTHER:PTHR43999	InterPro:SANT/Myb
InterPro:SANT_dom	SMART:SM00271	SMART:SM00717	SUPFAM:SSF46565	SUPFAM:SSF46689	UniParc:UPI0002951015
RefSeq:XP_006347682.1	SEG:seg	:	:	:	:

Description

Zuotin [Source:PGSC_GENE;Acc:PGSC0003DMG400003295]

Coordinates

chr1:-:74438212..74443032

Molecular Weight (calculated)

74070.4 Da

IEP (calculated)

8.928

GRAVY (calculated)

-0.919

Length

650 amino acids

Sequence
(BLAST)

001: MASRSSIRLI SYSEEIINGE PIFISSNCCP IKAHKYEPAG LAFHSAALRL IGHVEKEDPK DGKEDVPNDK EQTFAYSSES YSSKGKKKSS TGEKVQDHYA
101: LLGLSNLRYL ASEDQIRKSY RDAALRHHPD KLASLLLAEE TEAAKQAKKE EIENHFKAIQ EAYEVLMDPV RRRIYDSTDE FDDEIPTECA PQDFFKVFGP
201: AFLRNGRWSV TQPIPSLGDE NTPIKEVDSF YNFWYSFKSW REFPHTDEFD LEQAESRDHK RWMERQNAKL SEKARKEETA RVRTLVDNAY RKDPRILGRK
301: EAEKAEKQRK KEAKLLAKKL QEEEAIRIVE EEKRKKEEEG KKAAEVALQQ KKLKEKEKKL LRKERSRLRT LAAPVLSQRL LGLTDDDVEG LCMSLDIEQL
401: RNLCDKADGK GELVISELLR GALGHEHNPK YENKDEKIKS QQNGSLESKK QVPLMSSEKK EKPWSKEEID LLRKGMLKYP KGTSRRWEVI SDYIGTARTV
501: EEILKATKTV LLQKPDSAKA FDSFLEKRKP APTIVSPLST REEVEGVENS SKPESGSAKV ADSQETPSQN TNSQNTDDAP AANGVSSSSD SDIWSAVQEK
601: ALVQALKTFP KETSQRWERV ATAVPGKTMN QCKKKFALLK ENFRNKKSAV

Best Arabidopsis Sequence Match ( AT3G11450.1 )
(BLAST)

001: MPSRRSESAI RLITYSEELV DGKPFFAFSN CLPVKALNRE PAGHAFHSAA LKLHGCAEEP TDDEGGDKKV GDDKEKEYVP SFNSYANKGK KKSGTQQQDH
101: YALLGLSNLR YLATEDQIRK SYREAALKHH PDKLASLLLL EETEEAKEAK KDEIESRFKA IQEAYEVLMD PTRRRIFDST DEFDDEVPSD CLPQDFFKVF
201: GPAFKRNARW SVNQRIPDLG DENTPLKDVD KFYNFWYAFK SWREFPDEEE HDLEQADSRE ERRWMEKENA KKTVKARKEE HARIRTLVDN AYRKDPRIVK
301: RKEEEKAEKQ QKKDAKIQAK KKQEEDAAIA AEEEKRRKEE EEKRAAESAQ QQKKTKEREK KLLRKERNRL RTLSAPLVAQ RLLDISEEDI ENLCMSLNTE
401: QLQNLCDKMG NKEGLELAKV IKDGCNSSRN DEAESKEKVS KKTNGGTEPT TRVSQLDSST QKKQPWSKEE IDMLRKGMIK YPKGTSRRWE VISEYIGTGR
501: SVEEILKATK TVLLQKPDSA KAFDSFLEKR KPSASITSPL STREELGESL PTMTTTTNAK PSKETVVGKS SSSQSSDNNG EVGGSSDADS WSTVQERALV
601: QALKTFPKET SQRWERVAAA VPGKTMNQCK KKFAELKEII RNKKTGV

Arabidopsis Description

DnaJ and Myb-like DNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4J6A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.