CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004025_P001	Maize	nucleus	93.72	93.72
Zm00001d004033_P001	Maize	nucleus	93.57	93.57
OQU92158	Sorghum	nucleus	93.11	92.97
HORVU1Hr1G091820.1	Barley	nucleus	79.79	78.11
TraesCS1A01G420500.1	Wheat	cytosol	78.1	77.04
TraesCS1B01G451500.1	Wheat	cytosol	77.49	76.44
TraesCS1D01G428400.1	Wheat	nucleus	78.25	76.04
KRH26350	Soybean	nucleus	64.47	66.19
KRH44087	Soybean	nucleus	64.32	65.93
GSMUA_Achr2P05590_001	Banana	nucleus	57.89	64.4
PGSC0003DMT400008515	Potato	nucleus	63.09	63.38
VIT_01s0011g00790.t01	Wine grape	nucleus	62.94	63.33
Solyc01g096700.2.1	Tomato	nucleus	57.73	61.8
Bra034841.1-P	Field mustard	nucleus	60.34	61.56
CDY08525	Canola	nucleus	60.18	61.41
CDY11348	Canola	nucleus	22.36	60.33
CDY56850	Canola	nucleus	58.35	59.44
AT3G11450.1	Thale cress	nucleus	58.81	59.35
Bra005877.1-P	Field mustard	nucleus, plastid	41.35	58.95
Bra005875.1-P	Field mustard	nucleus	41.5	56.93
CDX80982	Canola	nucleus	36.45	56.4
AT5G06110.1	Thale cress	nucleus	57.12	56.26
Os04t0377932-00	Rice	nucleus	22.82	56.02
CDY11351	Canola	nucleus	32.16	56.0
CDX80983	Canola	nucleus	32.31	55.38
CDX73875	Canola	nucleus	52.07	54.31
Bra001404.1-P	Field mustard	nucleus	51.91	52.72
CDY53316	Canola	nucleus	52.53	52.37
Bra008278.1-P	Field mustard	nucleus	17.92	51.54
CDY11583	Canola	plastid	20.21	43.28
KXG24493	Sorghum	nucleus, plastid	12.4	25.47

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.287.110	MapMan:19.1.2.3	UniProt:A0A1B6PK99	ncoils:Coil	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf
InterPro:IPR001623	InterPro:IPR017877	InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlants:KXG26091	ProteinID:KXG26091
ProteinID:KXG26091.1	ProteinID:KXG26092.1	ProteinID:KXG26093.1	InterPro:Myb-like_dom	PFAM:PF00226	PFAM:PF00249
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS50090	PANTHER:PTHR43999	InterPro:SANT/Myb
SMART:SM00271	SMART:SM00717	EnsemblPlantsGene:SORBI_3006G049900	SUPFAM:SSF46565	SUPFAM:SSF46689	UniParc:UPI00081AC9A6
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:36790405..36795881

Molecular Weight (calculated)

73587.4 Da

IEP (calculated)

8.934

GRAVY (calculated)

-0.881

Length

653 amino acids

Sequence
(BLAST)

001: MESQKCFLIT YSQEIVDGVP LYVSSNCLPV KALKYEPAGH SFHAAAMKLL GLAEHEDIET DDRSVSSDDK SQDFNAGSHT FSSKGKKKSS GSQQQDHYAL
101: LGLGHLRFLA TEDQIRKSYR DMALKHHPDK QAALILAETT EEAKQAKKDE IESHFKAIQE AYEILIDPTK RRIYDSTDEF DDDVPTDCAP QDFFKVFGPA
201: FMRNGRWSVT QPIPSLGHDT TPVEEVDKFY NFWYNFKSWR EFPDDDEYDL EQAESREHKR WMERQNAKLQ EKAKKAEYAR VRTLVDNAYK KDPRIQRRKE
301: EEKAEKQRRK EAKYLAKKLQ EEEAARAGEV ERIRKEEESK KAAEAALHQK KLKEKEKKLL RKEKTRLRIL AAPVVADSHF GLSEANVEST CASLDMEQLK
401: KLCDGMDGKD AAEKARLLSN ALRNESSSKE AKKIEANGVE RSAPKSNSTG GRVTEGSSSI LNSYEKKERP WGKEEIEMLR KAIQKYPKGT SRRWEVVSEF
501: IGTSRSVEEI LKATKTVLLQ KPDSSKAFDS FLEKRKPTQS IASPLSTRDE ISSSTEGAET ALSKAAAQPA STQTANGKAV ADPVPDGAPS VSDPDAWTEA
601: QVLALLQALK AFPKDASQRW ERVAAAVPGK TVVQCKKKVA ARRENFRSKK SGE

Best Arabidopsis Sequence Match ( AT3G11450.1 )
(BLAST)

001: MPSRRSESAI RLITYSEELV DGKPFFAFSN CLPVKALNRE PAGHAFHSAA LKLHGCAEEP TDDEGGDKKV GDDKEKEYVP SFNSYANKGK KKSGTQQQDH
101: YALLGLSNLR YLATEDQIRK SYREAALKHH PDKLASLLLL EETEEAKEAK KDEIESRFKA IQEAYEVLMD PTRRRIFDST DEFDDEVPSD CLPQDFFKVF
201: GPAFKRNARW SVNQRIPDLG DENTPLKDVD KFYNFWYAFK SWREFPDEEE HDLEQADSRE ERRWMEKENA KKTVKARKEE HARIRTLVDN AYRKDPRIVK
301: RKEEEKAEKQ QKKDAKIQAK KKQEEDAAIA AEEEKRRKEE EEKRAAESAQ QQKKTKEREK KLLRKERNRL RTLSAPLVAQ RLLDISEEDI ENLCMSLNTE
401: QLQNLCDKMG NKEGLELAKV IKDGCNSSRN DEAESKEKVS KKTNGGTEPT TRVSQLDSST QKKQPWSKEE IDMLRKGMIK YPKGTSRRWE VISEYIGTGR
501: SVEEILKATK TVLLQKPDSA KAFDSFLEKR KPSASITSPL STREELGESL PTMTTTTNAK PSKETVVGKS SSSQSSDNNG EVGGSSDADS WSTVQERALV
601: QALKTFPKET SQRWERVAAA VPGKTMNQCK KKFAELKEII RNKKTGV

Arabidopsis Description

DnaJ and Myb-like DNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4J6A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.