Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11348 | Canola | nucleus | 54.27 | 94.63 |
| CDX80983 | Canola | nucleus | 85.31 | 94.49 |
| CDY11351 | Canola | nucleus | 83.65 | 94.13 |
| Bra008278.1-P | Field mustard | nucleus | 45.02 | 83.7 |
| CDY11583 | Canola | plastid | 40.52 | 56.07 |
| CDY56850 | Canola | nucleus | 65.88 | 43.37 |
| AT5G06110.1 | Thale cress | nucleus | 68.01 | 43.29 |
| CDY08525 | Canola | nucleus | 64.45 | 42.5 |
| KRH26350 | Soybean | nucleus | 57.82 | 38.36 |
| CDX73875 | Canola | nucleus | 56.87 | 38.34 |
| PGSC0003DMT400008515 | Potato | nucleus | 59.0 | 38.31 |
| KRH44087 | Soybean | nucleus | 57.58 | 38.15 |
| Zm00001d047099_P001 | Maize | nucleus | 30.81 | 38.12 |
| VIT_01s0011g00790.t01 | Wine grape | nucleus | 57.82 | 37.6 |
| CDY53316 | Canola | nucleus | 57.82 | 37.25 |
| Zm00001d004033_P001 | Maize | nucleus | 56.87 | 36.75 |
| OQU92158 | Sorghum | nucleus | 56.87 | 36.7 |
| Zm00001d004025_P001 | Maize | nucleus | 56.64 | 36.6 |
| KXG26091 | Sorghum | nucleus | 56.4 | 36.45 |
| Solyc01g096700.2.1 | Tomato | nucleus | 51.9 | 35.9 |
| HORVU1Hr1G091820.1 | Barley | nucleus | 56.64 | 35.83 |
| TraesCS1A01G420500.1 | Wheat | cytosol | 55.45 | 35.35 |
| TraesCS1B01G451500.1 | Wheat | cytosol | 55.45 | 35.35 |
| TraesCS1D01G428400.1 | Wheat | nucleus | 55.69 | 34.97 |
| GSMUA_Achr2P05590_001 | Banana | nucleus | 45.97 | 33.05 |
| Zm00001d047097_P001 | Maize | nucleus | 22.99 | 24.56 |
| Os04t0377932-00 | Rice | nucleus | 6.64 | 10.53 |
| CDY38980 | Canola | nucleus | 6.64 | 9.46 |
| CDY39426 | Canola | nucleus | 5.92 | 8.39 |
Protein Annotations
| EnsemblPlants:CDX80982 | EnsemblPlantsGene:GSBRNA2T00134411001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR43999 | PFAM:PF00226 | PFscan:PS50076 |
| PRINTS:PR00625 | ProteinID:CDX80982 | ProteinID:CDX80982.1 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI0004EF25FD | MapMan:19.1.2.3 | : | : | : |
Description
BnaC03g02360D
Coordinates
chrLK031823:-:1135963..1138110
Molecular Weight (calculated)
48910.4 Da
IEP (calculated)
7.617
GRAVY (calculated)
-1.154
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSLTSNSVK VVEDKEDTSD SPKKVANNDV EDIPSYETYK NSSSNKGKKK KNKSGKEVKE QHDHYALLGL ASLRYLATED QIRKSYRDAA LKHHPDKLAA
101: ALLLTEESEE AKEAKKEAIE SHFKLIQEAY EVLMDKTKRR IFDSTDEFDD EVPSECAPKD FFKVFGPAFK RNARWSVNTR VPDLGDENTP VKEVDSYYNF
201: WYAFKSWREF PEEEEHDLEE AESREEKRWM ERENARKTQK ARKEEYARIR TLVDNAYKKD PRIVKRKEEE KAKKQAKKDE KVMAKKKLEE EAAAAIEEEK
301: RRKEEEAKLA AEAAQQQKKN KEKEKKLRSK ERSRLRTLSA PVLSQRLLGI SVAYVEDLCM SLNTEQLRKL CDKMENKEGM KLAKVLKNDE TESEEEVVEA
401: KQNGHVEANG FATQSPRAAA MV
101: ALLLTEESEE AKEAKKEAIE SHFKLIQEAY EVLMDKTKRR IFDSTDEFDD EVPSECAPKD FFKVFGPAFK RNARWSVNTR VPDLGDENTP VKEVDSYYNF
201: WYAFKSWREF PEEEEHDLEE AESREEKRWM ERENARKTQK ARKEEYARIR TLVDNAYKKD PRIVKRKEEE KAKKQAKKDE KVMAKKKLEE EAAAAIEEEK
301: RRKEEEAKLA AEAAQQQKKN KEKEKKLRSK ERSRLRTLSA PVLSQRLLGI SVAYVEDLCM SLNTEQLRKL CDKMENKEGM KLAKVLKNDE TESEEEVVEA
401: KQNGHVEANG FATQSPRAAA MV
001: MQSWGINSAI KLLTYSSELK DGQALYASSN CHPVKALNRE PAGHAFHSAA LKLRGCAKEA TSKNEDTDKK VPKEKDGEYI PSYDSHNIKG KKKSGKLQHD
101: HYALLGLGNL RYLATDDQIR KSYRDAALKH HPDKLATLLL LEETEEAKQA KKDEIESHFK LIQEAYEVLM DSTKRRIFDS TDEFDDKVPT DCAPQDFFKV
201: FGPAFKRNAR WSNSPLPDLG DENTPLKEVD RFYSTWYTFK SWREFPEEEE HDIEQAESRE EKRWMERENA RKTQKARKEE YARIRTLVDN AYKKDIRIQK
301: RKDDEKAKKL QKKEAKVMAK RQQEEAAAAA IEEEKRRKEE EAKRAAEAAQ LHKRAKEREK KLLRKERSRL RVLSAPVLSQ RLLGISDEHV EDLCMSLNTE
401: QLRKLCDKME NKEGMALAKV IKNGSNIDDD KIEIEEEEVQ VAVKQNGHIE ANGHVEANGH VEAKVDTATH EKKEKPWSKE EIDMLRKGTT KFPKGTSQRW
501: EVISEYIGTG RSVEEILKAT KTVLLQKPDS AKAFDSFLEN RKPAASINSP LSTREELGEP IIPTKAHEDN NSTKTETAEQ NGKTKENNNS NGNSEPAAAS
601: GSDPDGWSAV QERALVQALK TFPKETNQRW ERVATAVPGK TMNQCKKKFA DLKDVIRTKK PTA
101: HYALLGLGNL RYLATDDQIR KSYRDAALKH HPDKLATLLL LEETEEAKQA KKDEIESHFK LIQEAYEVLM DSTKRRIFDS TDEFDDKVPT DCAPQDFFKV
201: FGPAFKRNAR WSNSPLPDLG DENTPLKEVD RFYSTWYTFK SWREFPEEEE HDIEQAESRE EKRWMERENA RKTQKARKEE YARIRTLVDN AYKKDIRIQK
301: RKDDEKAKKL QKKEAKVMAK RQQEEAAAAA IEEEKRRKEE EAKRAAEAAQ LHKRAKEREK KLLRKERSRL RVLSAPVLSQ RLLGISDEHV EDLCMSLNTE
401: QLRKLCDKME NKEGMALAKV IKNGSNIDDD KIEIEEEEVQ VAVKQNGHIE ANGHVEANGH VEAKVDTATH EKKEKPWSKE EIDMLRKGTT KFPKGTSQRW
501: EVISEYIGTG RSVEEILKAT KTVLLQKPDS AKAFDSFLEN RKPAASINSP LSTREELGEP IIPTKAHEDN NSTKTETAEQ NGKTKENNNS NGNSEPAAAS
601: GSDPDGWSAV QERALVQALK TFPKETNQRW ERVATAVPGK TMNQCKKKFA DLKDVIRTKK PTA
Arabidopsis Description
Cell division related protein-like [Source:UniProtKB/TrEMBL;Acc:Q9LHS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.