CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001404.1-P	Field mustard	nucleus	96.17	93.62
CDY53316	Canola	nucleus	92.81	88.7
CDY56850	Canola	nucleus	70.77	69.11
CDY08525	Canola	nucleus	70.45	68.91
AT3G11450.1	Thale cress	nucleus	70.45	68.16
KRH44087	Soybean	nucleus	59.27	58.24
KRH26350	Soybean	nucleus	58.95	58.02
CDX80982	Canola	nucleus	38.34	56.87
CDY11348	Canola	nucleus	21.73	56.2
PGSC0003DMT400008515	Potato	nucleus	58.15	56.0
VIT_01s0011g00790.t01	Wine grape	nucleus	57.51	55.47
CDY11351	Canola	nucleus	33.07	55.2
Solyc01g096700.2.1	Tomato	nucleus	53.51	54.92
CDX80983	Canola	nucleus	33.23	54.59
GSMUA_Achr2P05590_001	Banana	nucleus	49.52	52.81
KXG26091	Sorghum	nucleus	54.31	52.07
Zm00001d004025_P001	Maize	nucleus	54.31	52.07
Zm00001d004033_P001	Maize	nucleus	54.15	51.91
OQU92158	Sorghum	nucleus	53.99	51.68
HORVU1Hr1G091820.1	Barley	nucleus	53.83	50.52
TraesCS1A01G420500.1	Wheat	cytosol	53.35	50.45
TraesCS1B01G451500.1	Wheat	cytosol	53.19	50.3
TraesCS1D01G428400.1	Wheat	nucleus	52.72	49.11
Os04t0377932-00	Rice	nucleus	19.33	45.49
Zm00001d047099_P001	Maize	nucleus	23.32	42.82
CDY11583	Canola	plastid	20.13	41.31
Zm00001d047097_P001	Maize	nucleus	21.73	34.43
CDY38980	Canola	nucleus	12.3	26.01
CDY39426	Canola	nucleus	11.82	24.83

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.287.110	MapMan:19.1.2.3	GO:A0A078CAR2	EnsemblPlants:CDX73875	ProteinID:CDX73875
ProteinID:CDX73875.1	ncoils:Coil	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	EnsemblPlantsGene:GSBRNA2T00111591001	InterPro:Homeobox-like_sf	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF00249	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR43999	InterPro:SANT/Myb	SMART:SM00271	SMART:SM00717	SUPFAM:SSF46565	SUPFAM:SSF46689
UniParc:UPI0004EE3E0F	SEG:seg	:	:	:	:

Description

BnaA03g31720D

Coordinates

chrLK031800:+:357672..359552

Molecular Weight (calculated)

71798.9 Da

IEP (calculated)

9.750

GRAVY (calculated)

-1.074

Length

626 amino acids

Sequence
(BLAST)

001: MPRGRSDSAI KLITYSEELV DGKPFYAFSN SRPVKALNRE PAGHAFHSAA LKLHGFAEKP TDGEGSHKKV GDDDKDEEYV FPSFNPYANN KGRKKKKKPG
101: GTQKQQDHQQ DHYALLGLRN LRYLATEDQI KKSYREAALK HHPDKQHAAL LLAEETEEAM EAKKDEIGSR FRAIQEAYEV LMDPTKRKIF DSTDEFDDED
201: CSPEEFFKVF GPAFKRIAKL SATASQRVPD LGDENTKLKD VEKFYSFWYG FKSLREFPNG GKHDLEKADS RQERRWMGRE NAKETAKARK EDDVRIRNLV
301: DNAYRIDPRI TKREEEEKAK KQRKKEAKVM AEKKREEEAA EKEKMRKEEV KESAEKLKKD KEKERKLLLK ERNRLRTLSA HVLAQRLVSK EDVENLCMSL
401: NIQQLQNLND TMENKQGVEL ANVIKDHEAN SKEKESEKAN SKEKESEKAN CVDAEPTKLD NTKKKQPWSK EEIDKLRKGI IKYPKGISRR WEVISDYIGT
501: GRTVEEILKA TKTVLLQKPD SAKAFDTFLE KRKPTVSIAS PLSTREEELG ESLPMENNGE ASGSSDADGW SSVQERALVQ ALKTFTKVTS QRWERVAAAV
601: PGKTMVQCKK KFAELKELIR SKKTGV

Best Arabidopsis Sequence Match ( AT3G11450.1 )
(BLAST)

001: MPSRRSESAI RLITYSEELV DGKPFFAFSN CLPVKALNRE PAGHAFHSAA LKLHGCAEEP TDDEGGDKKV GDDKEKEYVP SFNSYANKGK KKSGTQQQDH
101: YALLGLSNLR YLATEDQIRK SYREAALKHH PDKLASLLLL EETEEAKEAK KDEIESRFKA IQEAYEVLMD PTRRRIFDST DEFDDEVPSD CLPQDFFKVF
201: GPAFKRNARW SVNQRIPDLG DENTPLKDVD KFYNFWYAFK SWREFPDEEE HDLEQADSRE ERRWMEKENA KKTVKARKEE HARIRTLVDN AYRKDPRIVK
301: RKEEEKAEKQ QKKDAKIQAK KKQEEDAAIA AEEEKRRKEE EEKRAAESAQ QQKKTKEREK KLLRKERNRL RTLSAPLVAQ RLLDISEEDI ENLCMSLNTE
401: QLQNLCDKMG NKEGLELAKV IKDGCNSSRN DEAESKEKVS KKTNGGTEPT TRVSQLDSST QKKQPWSKEE IDMLRKGMIK YPKGTSRRWE VISEYIGTGR
501: SVEEILKATK TVLLQKPDSA KAFDSFLEKR KPSASITSPL STREELGESL PTMTTTTNAK PSKETVVGKS SSSQSSDNNG EVGGSSDADS WSTVQERALV
601: QALKTFPKET SQRWERVAAA VPGKTMNQCK KKFAELKEII RNKKTGV

Arabidopsis Description

DnaJ and Myb-like DNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4J6A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.