Factsheet for AT3G11450.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034841.1-P	Field mustard	nucleus	82.69	83.59
CDY08525	Canola	nucleus	82.38	83.28
CDY56850	Canola	nucleus	81.61	82.37
CDX73875	Canola	nucleus	68.16	70.45
Bra001404.1-P	Field mustard	nucleus	68.01	68.43
CDY53316	Canola	nucleus	68.01	67.18
AT5G06110.1	Thale cress	nucleus	68.01	66.36
KRH26350	Soybean	nucleus	64.76	65.88
KRH44087	Soybean	nucleus	64.61	65.62
PGSC0003DMT400008515	Potato	nucleus	64.76	64.46
VIT_01s0011g00790.t01	Wine grape	nucleus	64.61	64.41
Solyc01g096700.2.1	Tomato	nucleus	59.2	62.79
GSMUA_Achr2P05590_001	Banana	nucleus	54.87	60.48
OQU92158	Sorghum	nucleus	59.97	59.33
Zm00001d004033_P001	Maize	nucleus	59.51	58.96
KXG26091	Sorghum	nucleus	59.35	58.81
Zm00001d004025_P001	Maize	nucleus	59.2	58.65
HORVU1Hr1G091820.1	Barley	nucleus	59.66	57.87
TraesCS1A01G420500.1	Wheat	cytosol	58.27	56.95
TraesCS1B01G451500.1	Wheat	cytosol	57.81	56.5
TraesCS1D01G428400.1	Wheat	nucleus	57.81	55.65
Zm00001d047099_P001	Maize	nucleus	26.28	49.85
Os04t0377932-00	Rice	nucleus	19.47	47.37
Zm00001d047097_P001	Maize	nucleus	22.87	37.47
AT5G45420.2	Thale cress	nucleus	11.44	23.95

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.287.110	MapMan:19.1.2.3	EntrezGene:820318	ProteinID:AEE75048.1	ArrayExpress:AT3G11450
EnsemblPlantsGene:AT3G11450	RefSeq:AT3G11450	TAIR:AT3G11450	RefSeq:AT3G11450-TAIR-G	EnsemblPlants:AT3G11450.1	TAIR:AT3G11450.1
Unigene:At.20710	ncoils:Coil	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	UniProt:F4J6A8	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006342
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009790	GO:GO:0009791
GO:GO:0009793	GO:GO:0009908	GO:GO:0009909	GO:GO:0009987	GO:GO:0016043	GO:GO:0040029
GO:GO:0048366	GO:GO:0051301	GO:GO:1902182	InterPro:Homeobox-like_sf	InterPro:IPR001623	InterPro:IPR017877
InterPro:IPR036869	InterPro:J_dom_sf	InterPro:Myb-like_dom	RefSeq:NP_187752.2	PFAM:PF00226	PFAM:PF00249
PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS50090	PANTHER:PTHR43999
InterPro:SANT/Myb	SMART:SM00271	SMART:SM00717	SUPFAM:SSF46565	SUPFAM:SSF46689	UniParc:UPI0001E92DA8
SEG:seg	:	:	:	:	:

Description

DnaJ and Myb-like DNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4J6A8]

Coordinates

chr3:-:3605126..3608092

Molecular Weight (calculated)

73993.9 Da

IEP (calculated)

8.853

GRAVY (calculated)

-1.072

Length

647 amino acids

Sequence
(BLAST)

001: MPSRRSESAI RLITYSEELV DGKPFFAFSN CLPVKALNRE PAGHAFHSAA LKLHGCAEEP TDDEGGDKKV GDDKEKEYVP SFNSYANKGK KKSGTQQQDH
101: YALLGLSNLR YLATEDQIRK SYREAALKHH PDKLASLLLL EETEEAKEAK KDEIESRFKA IQEAYEVLMD PTRRRIFDST DEFDDEVPSD CLPQDFFKVF
201: GPAFKRNARW SVNQRIPDLG DENTPLKDVD KFYNFWYAFK SWREFPDEEE HDLEQADSRE ERRWMEKENA KKTVKARKEE HARIRTLVDN AYRKDPRIVK
301: RKEEEKAEKQ QKKDAKIQAK KKQEEDAAIA AEEEKRRKEE EEKRAAESAQ QQKKTKEREK KLLRKERNRL RTLSAPLVAQ RLLDISEEDI ENLCMSLNTE
401: QLQNLCDKMG NKEGLELAKV IKDGCNSSRN DEAESKEKVS KKTNGGTEPT TRVSQLDSST QKKQPWSKEE IDMLRKGMIK YPKGTSRRWE VISEYIGTGR
501: SVEEILKATK TVLLQKPDSA KAFDSFLEKR KPSASITSPL STREELGESL PTMTTTTNAK PSKETVVGKS SSSQSSDNNG EVGGSSDADS WSTVQERALV
601: QALKTFPKET SQRWERVAAA VPGKTMNQCK KKFAELKEII RNKKTGV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.