Factsheet for Bra001404.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73875	Canola	nucleus	93.62	96.17
Bra034841.1-P	Field mustard	nucleus	68.12	68.44
AT3G11450.1	Thale cress	nucleus	68.43	68.01
Bra005877.1-P	Field mustard	nucleus, plastid	42.15	59.17
KRH44087	Soybean	nucleus	58.48	59.03
KRH26350	Soybean	nucleus	57.7	58.33
Bra005875.1-P	Field mustard	nucleus	42.15	56.93
VIT_01s0011g00790.t01	Wine grape	nucleus	55.83	55.32
PGSC0003DMT400008515	Potato	nucleus	55.83	55.23
Solyc01g096700.2.1	Tomato	nucleus	51.48	54.26
GSMUA_Achr2P05590_001	Banana	nucleus	48.21	52.81
KXG26091	Sorghum	nucleus	52.72	51.91
Zm00001d004033_P001	Maize	nucleus	52.57	51.76
Zm00001d004025_P001	Maize	nucleus	52.57	51.76
OQU92158	Sorghum	nucleus	52.41	51.53
Bra008278.1-P	Field mustard	nucleus	17.88	50.66
HORVU1Hr1G091820.1	Barley	nucleus	51.94	50.08
TraesCS1A01G420500.1	Wheat	cytosol	51.48	50.0
TraesCS1B01G451500.1	Wheat	cytosol	51.32	49.85
TraesCS1D01G428400.1	Wheat	nucleus	51.17	48.96
Os04t0377932-00	Rice	nucleus	18.51	44.74
Zm00001d047099_P001	Maize	nucleus	23.17	43.7
Zm00001d047097_P001	Maize	nucleus	21.15	34.43
Bra025078.1-P	Field mustard	nucleus	11.35	24.41

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.287.110	MapMan:19.1.2.3	EnsemblPlantsGene:Bra001404	EnsemblPlants:Bra001404.1	EnsemblPlants:Bra001404.1-P
ncoils:Coil	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4CB25
PFAM:PF00226	PFAM:PF00249	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR43999
InterPro:SANT/Myb	SMART:SM00271	SMART:SM00717	SUPFAM:SSF46565	SUPFAM:SSF46689	UniParc:UPI0002540719
SEG:seg	:	:	:	:	:

Description

AT3G11450 (E=5e-075) | DNAJ heat shock N-terminal domain-containing protein / cell division protein-related

Coordinates

chrA03:-:16206979..16208910

Molecular Weight (calculated)

73848.4 Da

IEP (calculated)

9.815

GRAVY (calculated)

-1.112

Length

643 amino acids

Sequence
(BLAST)

001: MPRGRSDSAI KLITYSEELV DGKPFYAFSN SRPVKALNRE PAGHAFHSAA LKLHGFAEKP TDGEGSHKKV GDDDKDEEYV FPSFNPYANN KGRKKKKKPG
101: GTQQQQDHQQ DHYALLGLRN LRYLATEDQI KKSYREAALK HHPDKQHAAL LLAEETEEAM EAKKDEIGSR FRAIQEAYEV LMDRTKRKIF DSTDEFDDED
201: CSPEEFFKVF GPAFKRIAKL SATASQRVPD LGDENTKLKD VEKFYSFWYG FKSLREFPNG GKHDLEKADS RQERRWMGRE NAKKTAKDRK EDDVRIRNLV
301: DNAYRIDPRI AKREEEEKAK KQRKKEAKVM AEKKREEEAA EKEKMRKEEA KESAEKLKKD KEKERKLLLK ERNRRRTISA HVLAQCLVSK EDVENLCMSL
401: NIQQLQSLCD TMGNKQGIEL AKVIKDHQAN SKEKENEKAN FKEKECEKAN VEPTKLDNTQ KKENEKADGD AKPTKLDNTK KKQPWSKEEI DKLRKGIIKY
501: PKGISRRWEV ILDYIGTGRT VEEILKATKT VLLQKPDSAK AFDTFLEKRK PTVSIASPLS TREEELGESL PMENNGESSG SSDADGWSSV QERALVQALK
601: TFTKETSQRW ERVAAAVPGK TMVQCKKKFA ELKELIRSKK TGV

Best Arabidopsis Sequence Match ( AT3G11450.1 )
(BLAST)

001: MPSRRSESAI RLITYSEELV DGKPFFAFSN CLPVKALNRE PAGHAFHSAA LKLHGCAEEP TDDEGGDKKV GDDKEKEYVP SFNSYANKGK KKSGTQQQDH
101: YALLGLSNLR YLATEDQIRK SYREAALKHH PDKLASLLLL EETEEAKEAK KDEIESRFKA IQEAYEVLMD PTRRRIFDST DEFDDEVPSD CLPQDFFKVF
201: GPAFKRNARW SVNQRIPDLG DENTPLKDVD KFYNFWYAFK SWREFPDEEE HDLEQADSRE ERRWMEKENA KKTVKARKEE HARIRTLVDN AYRKDPRIVK
301: RKEEEKAEKQ QKKDAKIQAK KKQEEDAAIA AEEEKRRKEE EEKRAAESAQ QQKKTKEREK KLLRKERNRL RTLSAPLVAQ RLLDISEEDI ENLCMSLNTE
401: QLQNLCDKMG NKEGLELAKV IKDGCNSSRN DEAESKEKVS KKTNGGTEPT TRVSQLDSST QKKQPWSKEE IDMLRKGMIK YPKGTSRRWE VISEYIGTGR
501: SVEEILKATK TVLLQKPDSA KAFDSFLEKR KPSASITSPL STREELGESL PTMTTTTNAK PSKETVVGKS SSSQSSDNNG EVGGSSDADS WSTVQERALV
601: QALKTFPKET SQRWERVAAA VPGKTMNQCK KKFAELKEII RNKKTGV

Arabidopsis Description

DnaJ and Myb-like DNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4J6A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.