Factsheet for Bra034841.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08525	Canola	nucleus	99.69	99.69
CDY56850	Canola	nucleus	90.0	89.86
AT3G11450.1	Thale cress	nucleus	83.59	82.69
Bra005877.1-P	Field mustard	nucleus, plastid	48.91	68.34
Bra001404.1-P	Field mustard	nucleus	68.44	68.12
Bra005875.1-P	Field mustard	nucleus	48.75	65.55
KRH44087	Soybean	nucleus	65.0	65.31
KRH26350	Soybean	nucleus	64.69	65.09
PGSC0003DMT400008515	Potato	nucleus	65.0	64.0
Solyc01g096700.2.1	Tomato	nucleus	60.16	63.11
VIT_01s0011g00790.t01	Wine grape	nucleus	63.91	63.02
Bra008278.1-P	Field mustard	nucleus	22.34	63.0
OQU92158	Sorghum	nucleus	62.19	60.86
KXG26091	Sorghum	nucleus	61.56	60.34
Zm00001d004025_P001	Maize	nucleus	61.25	60.03
Zm00001d004033_P001	Maize	nucleus	61.09	59.88
GSMUA_Achr2P05590_001	Banana	nucleus	54.53	59.45
HORVU1Hr1G091820.1	Barley	nucleus	60.62	58.17
TraesCS1A01G420500.1	Wheat	cytosol	59.53	57.55
TraesCS1B01G451500.1	Wheat	cytosol	59.22	57.25
TraesCS1D01G428400.1	Wheat	nucleus	58.91	56.1
Zm00001d047099_P001	Maize	nucleus	26.41	49.56
Os04t0377932-00	Rice	nucleus	19.53	46.99
Zm00001d047097_P001	Maize	nucleus	23.75	38.48
Bra025078.1-P	Field mustard	nucleus	11.25	24.08

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.287.110	MapMan:19.1.2.3	EnsemblPlantsGene:Bra034841	EnsemblPlants:Bra034841.1	EnsemblPlants:Bra034841.1-P
ncoils:Coil	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR001623	InterPro:IPR017877	InterPro:IPR036869	InterPro:J_dom_sf
UniProt:M4F195	InterPro:Myb-like_dom	PFAM:PF00226	PFAM:PF00249	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PFscan:PS50090	PANTHER:PTHR43999	InterPro:SANT/Myb	SMART:SM00271	SMART:SM00717
SUPFAM:SSF46565	SUPFAM:SSF46689	UniParc:UPI000254763D	SEG:seg	:	:

Description

AT3G11450 (E=3e-240) | DNAJ heat shock N-terminal domain-containing protein / cell division protein-related

Coordinates

chrA05:+:21665172..21667094

Molecular Weight (calculated)

72722.7 Da

IEP (calculated)

8.577

GRAVY (calculated)

-0.973

Length

640 amino acids

Sequence
(BLAST)

001: MPSVRSDSSI KLLITYSEEL VDGKPLYASS NSLPVKALNR EPAGHAFHSA ALKLHGCAEE PTDSEGDDKK AGGDDKEKEY VPSFNSYSNK GKKKSGTQQQ
101: DHYALLGLSN LRYLATEDQI RKSYREAALK HHPDKMASLL LAEETEEAKE AKKEEIESRF KAIQEAYEVL MDPLKRRIFD STDEFDDEVP TDCAPQDFFK
201: VFGPAFKRNA RWSVNQRIPD LGDENTKLKE VDRFYNFWYA FKSWREFPDE EEHDLEQADS REERRWMEKE NARATAKARK EEHARIRTLV DNAYRKDPRI
301: VKRKEEEKAE KQQKKDAKLM AKKKQEEEAA IAAAEEKRRK EEEEKRAVES AQQQKKAKEK EKKLIRKERN RLRALSAPVV AQRLLDISEE DIESLCMTLN
401: IEELQSLCDK MGNKEGVELA KVIKDGSRDQ EANSKEKESE KPNGGGAERV SVLESTQKKQ PWSKEEIDML RKGMIKYPKG TSRRWEVISE YIGTGRSVEE
501: ILKATKTVLL QKPDSAKAFD SFLEKRKPTA TIASPLSTRE ELGESLPAGA TTKVKPPVKE TVVVGQSSES NGEASGSSVD TDGWSSVQER ALVQALKTFP
601: KETSQRWERV AAAVPGKTVI QCKKKFAELK EIIRSKKTAV

Best Arabidopsis Sequence Match ( AT3G11450.1 )
(BLAST)

001: MPSRRSESAI RLITYSEELV DGKPFFAFSN CLPVKALNRE PAGHAFHSAA LKLHGCAEEP TDDEGGDKKV GDDKEKEYVP SFNSYANKGK KKSGTQQQDH
101: YALLGLSNLR YLATEDQIRK SYREAALKHH PDKLASLLLL EETEEAKEAK KDEIESRFKA IQEAYEVLMD PTRRRIFDST DEFDDEVPSD CLPQDFFKVF
201: GPAFKRNARW SVNQRIPDLG DENTPLKDVD KFYNFWYAFK SWREFPDEEE HDLEQADSRE ERRWMEKENA KKTVKARKEE HARIRTLVDN AYRKDPRIVK
301: RKEEEKAEKQ QKKDAKIQAK KKQEEDAAIA AEEEKRRKEE EEKRAAESAQ QQKKTKEREK KLLRKERNRL RTLSAPLVAQ RLLDISEEDI ENLCMSLNTE
401: QLQNLCDKMG NKEGLELAKV IKDGCNSSRN DEAESKEKVS KKTNGGTEPT TRVSQLDSST QKKQPWSKEE IDMLRKGMIK YPKGTSRRWE VISEYIGTGR
501: SVEEILKATK TVLLQKPDSA KAFDSFLEKR KPSASITSPL STREELGESL PTMTTTTNAK PSKETVVGKS SSSQSSDNNG EVGGSSDADS WSTVQERALV
601: QALKTFPKET SQRWERVAAA VPGKTMNQCK KKFAELKEII RNKKTGV

Arabidopsis Description

DnaJ and Myb-like DNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4J6A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.