Factsheet for HORVU1Hr1G091820.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	golgi, nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G420500.1	Wheat	cytosol	92.65	93.35
TraesCS1B01G451500.1	Wheat	cytosol	92.05	92.75
TraesCS1D01G428400.1	Wheat	nucleus	92.65	91.96
KXG26091	Sorghum	nucleus	78.11	79.79
OQU92158	Sorghum	nucleus	77.96	79.51
Zm00001d004025_P001	Maize	nucleus	77.81	79.48
Zm00001d004033_P001	Maize	nucleus	77.21	78.87
Zm00001d047099_P001	Maize	nucleus	35.53	69.5
KRH26350	Soybean	nucleus	62.82	65.88
KRH44087	Soybean	nucleus	62.37	65.31
PGSC0003DMT400008515	Potato	nucleus	62.22	63.85
VIT_01s0011g00790.t01	Wine grape	nucleus	60.87	62.56
GSMUA_Achr2P05590_001	Banana	nucleus	55.02	62.52
Solyc01g096700.2.1	Tomato	nucleus	57.12	62.46
CDY08525	Canola	nucleus	58.17	60.62
Bra034841.1-P	Field mustard	nucleus	58.17	60.62
CDY11348	Canola	nucleus	21.89	60.33
AT3G11450.1	Thale cress	nucleus	57.87	59.66
CDY56850	Canola	nucleus	57.12	59.44
Bra005877.1-P	Field mustard	nucleus, plastid	40.18	58.52
AT5G06110.1	Thale cress	nucleus	57.27	57.62
Os04t0377932-00	Rice	nucleus	22.64	56.77
Bra005875.1-P	Field mustard	nucleus	40.48	56.72
CDX80982	Canola	nucleus	35.83	56.64
CDY11351	Canola	nucleus	31.48	56.0
CDX80983	Canola	nucleus	31.78	55.64
Zm00001d047097_P001	Maize	nucleus	32.38	54.68
CDX73875	Canola	nucleus	50.52	53.83
Bra008278.1-P	Field mustard	nucleus	17.69	51.98
Bra001404.1-P	Field mustard	nucleus	50.08	51.94
CDY53316	Canola	nucleus	50.97	51.91
CDY11583	Canola	plastid	19.64	42.95
HORVU7Hr1G070730.1	Barley	nucleus	11.69	25.08

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.287.110	MapMan:19.1.2.3	ncoils:Coil	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	EnsemblPlantsGene:HORVU1Hr1G091820	EnsemblPlants:HORVU1Hr1G091820.1
InterPro:Homeobox-like_sf	InterPro:IPR001623	InterPro:IPR017877	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0Y5F8
InterPro:Myb-like_dom	PFAM:PF00226	PFAM:PF00249	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS50090	PANTHER:PTHR43999	InterPro:SANT/Myb	SMART:SM00271	SMART:SM00717	SUPFAM:SSF46565
SUPFAM:SSF46689	UniParc:UPI0002958BCD	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:549041874..549046575

Molecular Weight (calculated)

74827.8 Da

IEP (calculated)

8.939

GRAVY (calculated)

-0.916

Length

667 amino acids

Sequence
(BLAST)

001: MGSKRSCLLI TYSPEIVDGV PLYVSSNCLP VKASKYEPAG HSFHAVALKL RGLDEKEDTE TDDRSVSSDD KSQDFSAGSD NFSSKGKKKS GSGSQQQDHY
101: ALLGLGNLRF LATEDQIRKS YRDMALKHHP DKQAALLLHE TTEAAKQAKK DEIESHFKAI QEAYEVLMDP TKRRIFDSTD EFDDDIPTDC APQDFFKVFG
201: PAFMRNGRWS VSQPIPSLGD DSTPVVDVDQ FYNFWYNFKS WREFPHEDEY DLEQAESREH KRWMERQNAK IQEKAKKVEY TRVRNLVDNA YRKDPRIQRR
301: KEEEKAEKQR RKEAKYMAKK LQEEEAARAA EEERKRKEEE AKVAAAAALN QKKLKEKEKK LLRKEKSRLR TLVAPVVAEP SFSLSADDVE TVCTSHDVEH
401: LKKLCDIMED KDTAEKARLL RGALNKEENS SNTSKEEKIH ANGVAGSTPK STAPQGPPKS TAPQVITLGN YEKKEKPWGK EEIELLRKAI QKYPKGTSRR
501: WEVVSEFIGT GRSVEEILKA TKTVLLQKPD STKAFDSFLE KRKAAPSIVS PLSTRDGTEP SKPAGGSTLG AGSEPSKAAE QPAASSSQTA NEKTGADPVP
601: EEAPSATDPD AWSEAQVLAL VQALKAFPKD ANQRWERVAT AVPGKTVVQC KKKVSSMRSN FRTKKAE

Best Arabidopsis Sequence Match ( AT3G11450.1 )
(BLAST)

001: MPSRRSESAI RLITYSEELV DGKPFFAFSN CLPVKALNRE PAGHAFHSAA LKLHGCAEEP TDDEGGDKKV GDDKEKEYVP SFNSYANKGK KKSGTQQQDH
101: YALLGLSNLR YLATEDQIRK SYREAALKHH PDKLASLLLL EETEEAKEAK KDEIESRFKA IQEAYEVLMD PTRRRIFDST DEFDDEVPSD CLPQDFFKVF
201: GPAFKRNARW SVNQRIPDLG DENTPLKDVD KFYNFWYAFK SWREFPDEEE HDLEQADSRE ERRWMEKENA KKTVKARKEE HARIRTLVDN AYRKDPRIVK
301: RKEEEKAEKQ QKKDAKIQAK KKQEEDAAIA AEEEKRRKEE EEKRAAESAQ QQKKTKEREK KLLRKERNRL RTLSAPLVAQ RLLDISEEDI ENLCMSLNTE
401: QLQNLCDKMG NKEGLELAKV IKDGCNSSRN DEAESKEKVS KKTNGGTEPT TRVSQLDSST QKKQPWSKEE IDMLRKGMIK YPKGTSRRWE VISEYIGTGR
501: SVEEILKATK TVLLQKPDSA KAFDSFLEKR KPSASITSPL STREELGESL PTMTTTTNAK PSKETVVGKS SSSQSSDNNG EVGGSSDADS WSTVQERALV
601: QALKTFPKET SQRWERVAAA VPGKTMNQCK KKFAELKEII RNKKTGV

Arabidopsis Description

DnaJ and Myb-like DNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4J6A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.