CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11348	Canola	nucleus	52.46	66.12
CDY11351	Canola	nucleus	56.07	45.6
CDX80983	Canola	nucleus	56.07	44.88
CDX80982	Canola	nucleus	56.07	40.52
Zm00001d047099_P001	Maize	nucleus	32.79	29.33
CDY08525	Canola	nucleus	50.82	24.22
CDY56850	Canola	nucleus	50.82	24.18
AT5G06110.1	Thale cress	nucleus	50.82	23.38
KRH26350	Soybean	nucleus	43.93	21.07
KRH44087	Soybean	nucleus	43.93	21.04
VIT_01s0011g00790.t01	Wine grape	nucleus	44.26	20.8
PGSC0003DMT400008515	Potato	nucleus	44.26	20.77
OQU92158	Sorghum	nucleus	43.93	20.49
Zm00001d004033_P001	Maize	nucleus	43.61	20.37
Zm00001d004025_P001	Maize	nucleus	43.28	20.21
KXG26091	Sorghum	nucleus	43.28	20.21
CDX73875	Canola	nucleus	41.31	20.13
TraesCS1A01G420500.1	Wheat	cytosol	42.95	19.79
HORVU1Hr1G091820.1	Barley	nucleus	42.95	19.64
TraesCS1B01G451500.1	Wheat	cytosol	42.62	19.64
TraesCS1D01G428400.1	Wheat	nucleus	42.95	19.49
CDY53316	Canola	nucleus	40.98	19.08
Solyc01g096700.2.1	Tomato	nucleus	34.75	17.38
Zm00001d047097_P001	Maize	nucleus	22.3	17.22
GSMUA_Achr2P05590_001	Banana	nucleus	29.18	15.16
Os04t0377932-00	Rice	nucleus	9.51	10.9
CDY38980	Canola	nucleus	10.49	10.81
CDY39426	Canola	nucleus	9.18	9.4

Protein Annotations

KEGG:00270+6.3.2.3	KEGG:00480+6.3.2.3	MapMan:19.1.2.3	Gene3D:3.30.1490.80	UniProt:A0A078FHP8	EnsemblPlants:CDY11583
ProteinID:CDY11583	ProteinID:CDY11583.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004363	GO:GO:0005488	GO:GO:0005524	GO:GO:0006750	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00049696001	InterPro:Glutathione_synthase_N_euk	InterPro:IPR014049	PANTHER:PTHR43999
UniParc:UPI0004EF2501	SEG:seg	:	:	:	:

Description

BnaC06g31560DBnaC06g31560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHP8]

Coordinates

chrLK032012:-:274259..275529

Molecular Weight (calculated)

35032.3 Da

IEP (calculated)

7.298

GRAVY (calculated)

-0.926

Length

305 amino acids

Sequence
(BLAST)

001: MVGGCSPLSY SSSSTFIATT TLSSPTSLFP RSFLIQCPLN LRKPAPLRCL SSLTMESPKP ILDFEKFDDG FVQKLVYDAL VWSSLHGLVV GDKNLSEIRN
101: PGENDFFKVF GPAFKRNARW SVNTRVPDLG DENTPVKEVD SYYNFWYAFK SWREFPEEEE HDLEEADSRE EKRWMERENA RKTQKARKEE YARIRTLVDN
201: AYKKDPRIVK RKEEEKAKKQ AKKDEKVMAK KKLEEEAAAA IEEEKRRKEE EAKLAAEAAQ QQKKKQGEGE EASKLCDKME NKEGLKLANV LKNGNNDETE
301: TAAMV

Best Arabidopsis Sequence Match ( AT3G11450.1 )
(BLAST)

001: MPSRRSESAI RLITYSEELV DGKPFFAFSN CLPVKALNRE PAGHAFHSAA LKLHGCAEEP TDDEGGDKKV GDDKEKEYVP SFNSYANKGK KKSGTQQQDH
101: YALLGLSNLR YLATEDQIRK SYREAALKHH PDKLASLLLL EETEEAKEAK KDEIESRFKA IQEAYEVLMD PTRRRIFDST DEFDDEVPSD CLPQDFFKVF
201: GPAFKRNARW SVNQRIPDLG DENTPLKDVD KFYNFWYAFK SWREFPDEEE HDLEQADSRE ERRWMEKENA KKTVKARKEE HARIRTLVDN AYRKDPRIVK
301: RKEEEKAEKQ QKKDAKIQAK KKQEEDAAIA AEEEKRRKEE EEKRAAESAQ QQKKTKEREK KLLRKERNRL RTLSAPLVAQ RLLDISEEDI ENLCMSLNTE
401: QLQNLCDKMG NKEGLELAKV IKDGCNSSRN DEAESKEKVS KKTNGGTEPT TRVSQLDSST QKKQPWSKEE IDMLRKGMIK YPKGTSRRWE VISEYIGTGR
501: SVEEILKATK TVLLQKPDSA KAFDSFLEKR KPSASITSPL STREELGESL PTMTTTTNAK PSKETVVGKS SSSQSSDNNG EVGGSSDADS WSTVQERALV
601: QALKTFPKET SQRWERVAAA VPGKTMNQCK KKFAELKEII RNKKTGV

Arabidopsis Description

DnaJ and Myb-like DNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4J6A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.