Factsheet for AT5G06110.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005877.1-P	Field mustard	nucleus, plastid	49.47	71.62
Bra005875.1-P	Field mustard	nucleus	49.32	68.7
CDY11348	Canola	nucleus	24.89	68.18
CDX80982	Canola	nucleus	43.29	68.01
AT3G11450.1	Thale cress	nucleus	66.36	68.01
CDY11351	Canola	nucleus	36.35	64.27
CDX80983	Canola	nucleus	36.5	63.52
KRH26350	Soybean	nucleus	60.78	63.36
KRH44087	Soybean	nucleus	60.18	62.64
Bra008278.1-P	Field mustard	nucleus	21.27	62.11
VIT_01s0011g00790.t01	Wine grape	nucleus	60.33	61.63
PGSC0003DMT400008515	Potato	nucleus	59.58	60.77
Solyc01g096700.2.1	Tomato	nucleus	55.51	60.33
GSMUA_Achr2P05590_001	Banana	nucleus	51.28	57.92
HORVU1Hr1G091820.1	Barley	nucleus	57.62	57.27
KXG26091	Sorghum	nucleus	56.26	57.12
OQU92158	Sorghum	nucleus	56.26	57.03
TraesCS1A01G420500.1	Wheat	cytosol	56.71	56.8
Zm00001d004033_P001	Maize	nucleus	55.81	56.66
Zm00001d004025_P001	Maize	nucleus	55.81	56.66
TraesCS1B01G451500.1	Wheat	cytosol	56.41	56.5
TraesCS1D01G428400.1	Wheat	nucleus	56.71	55.95
CDY11583	Canola	plastid	23.38	50.82
Zm00001d047099_P001	Maize	nucleus	24.89	48.39
Os04t0377932-00	Rice	nucleus	18.25	45.49
Zm00001d047097_P001	Maize	nucleus	22.47	37.72
AT5G45420.2	Thale cress	nucleus	10.86	23.3

Protein Annotations

Gene3D:1.10.10.60	Gene3D:1.10.287.110	MapMan:19.1.2.3	EntrezGene:830498	UniProt:A0A178UFW7	ProteinID:AED90967.1
ProteinID:AED90968.1	ArrayExpress:AT5G06110	EnsemblPlantsGene:AT5G06110	RefSeq:AT5G06110	TAIR:AT5G06110	RefSeq:AT5G06110-TAIR-G
EnsemblPlants:AT5G06110.1	TAIR:AT5G06110.1	Unigene:At.32898	ProteinID:BAA98200.1	ncoils:Coil	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0006139	GO:GO:0006342	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009908	GO:GO:0009909
GO:GO:0009987	GO:GO:0016043	GO:GO:0040029	GO:GO:0042393	GO:GO:0043130	GO:GO:0048366
GO:GO:0051301	GO:GO:1902182	InterPro:Homeobox-like_sf	InterPro:IPR001623	InterPro:IPR017877	InterPro:IPR036869
InterPro:J_dom_sf	InterPro:Myb-like_dom	RefSeq:NP_001190234.1	RefSeq:NP_196229.1	ProteinID:OAO92002.1	PFAM:PF00226
PFAM:PF00249	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS50090	PANTHER:PTHR43999
UniProt:Q9LHS5	InterPro:SANT/Myb	SMART:SM00271	SMART:SM00717	SUPFAM:SSF46565	SUPFAM:SSF46689
UniParc:UPI000009CF5F	SEG:seg	:	:	:	:

Description

Cell division related protein-like [Source:UniProtKB/TrEMBL;Acc:Q9LHS5]

Coordinates

chr5:-:1840755..1843872

Molecular Weight (calculated)

75637.0 Da

IEP (calculated)

8.937

GRAVY (calculated)

-1.047

Length

663 amino acids

Sequence
(BLAST)

001: MQSWGINSAI KLLTYSSELK DGQALYASSN CHPVKALNRE PAGHAFHSAA LKLRGCAKEA TSKNEDTDKK VPKEKDGEYI PSYDSHNIKG KKKSGKLQHD
101: HYALLGLGNL RYLATDDQIR KSYRDAALKH HPDKLATLLL LEETEEAKQA KKDEIESHFK LIQEAYEVLM DSTKRRIFDS TDEFDDKVPT DCAPQDFFKV
201: FGPAFKRNAR WSNSPLPDLG DENTPLKEVD RFYSTWYTFK SWREFPEEEE HDIEQAESRE EKRWMERENA RKTQKARKEE YARIRTLVDN AYKKDIRIQK
301: RKDDEKAKKL QKKEAKVMAK RQQEEAAAAA IEEEKRRKEE EAKRAAEAAQ LHKRAKEREK KLLRKERSRL RVLSAPVLSQ RLLGISDEHV EDLCMSLNTE
401: QLRKLCDKME NKEGMALAKV IKNGSNIDDD KIEIEEEEVQ VAVKQNGHIE ANGHVEANGH VEAKVDTATH EKKEKPWSKE EIDMLRKGTT KFPKGTSQRW
501: EVISEYIGTG RSVEEILKAT KTVLLQKPDS AKAFDSFLEN RKPAASINSP LSTREELGEP IIPTKAHEDN NSTKTETAEQ NGKTKENNNS NGNSEPAAAS
601: GSDPDGWSAV QERALVQALK TFPKETNQRW ERVATAVPGK TMNQCKKKFA DLKDVIRTKK PTA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.