Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30607 | Canola | nucleus | 94.19 | 45.89 |
| CDY17742 | Canola | nucleus | 93.02 | 45.07 |
| Bra036051.1-P | Field mustard | nucleus | 91.28 | 44.48 |
| CDY02095 | Canola | nucleus | 65.12 | 34.15 |
| CDY23022 | Canola | nucleus | 64.53 | 33.74 |
| CDX83112 | Canola | nucleus | 67.44 | 32.95 |
| CDX68573 | Canola | nucleus | 65.12 | 31.82 |
| Solyc02g064860.1.1 | Tomato | nucleus | 37.79 | 27.66 |
| Solyc02g064910.1.1 | Tomato | nucleus | 37.79 | 27.66 |
| PGSC0003DMT400068629 | Potato | cytosol | 38.37 | 27.5 |
| CDY01425 | Canola | nucleus | 56.4 | 27.4 |
| CDY12825 | Canola | nucleus | 56.98 | 27.37 |
| PGSC0003DMT400031329 | Potato | nucleus | 41.28 | 22.05 |
| PGSC0003DMT400068627 | Potato | nucleus | 38.37 | 21.43 |
| Solyc02g092980.2.1 | Tomato | nucleus | 44.19 | 21.17 |
| KRH04529 | Soybean | nucleus | 44.77 | 20.75 |
| PGSC0003DMT400064307 | Potato | nucleus | 43.6 | 20.66 |
| KRH57973 | Soybean | nucleus | 45.35 | 20.37 |
| CDX81286 | Canola | nucleus | 30.81 | 19.92 |
| CDX75405 | Canola | nucleus | 43.02 | 19.84 |
| CDY49278 | Canola | nucleus | 42.44 | 19.78 |
| CDY69708 | Canola | nucleus | 42.44 | 19.52 |
| CDX72453 | Canola | nucleus | 40.7 | 19.44 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.47 | 19.24 |
| CDY54717 | Canola | nucleus | 29.07 | 18.8 |
| Solyc02g064900.1.1 | Tomato | nucleus | 37.79 | 18.79 |
| CDX76265 | Canola | nucleus | 39.53 | 18.63 |
| CDY57741 | Canola | nucleus | 38.95 | 18.36 |
| KRH28424 | Soybean | nucleus | 34.88 | 17.91 |
| KRH77050 | Soybean | nucleus, plastid | 33.14 | 17.07 |
| CDY11608 | Canola | nucleus | 30.23 | 16.4 |
| CDY38800 | Canola | nucleus | 29.65 | 15.99 |
| CDY67142 | Canola | nucleus | 31.4 | 15.93 |
| CDY33959 | Canola | nucleus | 27.91 | 15.74 |
| CDY14561 | Canola | cytosol | 29.65 | 15.69 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 31.4 | 15.65 |
| CDY08795 | Canola | nucleus | 27.91 | 15.58 |
| CDY37828 | Canola | nucleus | 27.91 | 15.53 |
| CDX97009 | Canola | nucleus | 26.16 | 15.36 |
| CDY59943 | Canola | nucleus | 31.98 | 15.24 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 34.3 | 15.21 |
| CDX69832 | Canola | nucleus | 26.16 | 15.15 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 35.47 | 14.99 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 30.81 | 14.64 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 29.65 | 14.41 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 29.65 | 14.41 |
| CDY13755 | Canola | nucleus | 24.42 | 14.38 |
| Os09t0111100-01 | Rice | cytosol | 30.23 | 14.29 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 29.07 | 14.24 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 29.07 | 14.12 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 33.14 | 14.0 |
| CDX76917 | Canola | nucleus | 27.91 | 13.56 |
| CDX89480 | Canola | nucleus | 27.91 | 13.52 |
| CDY25602 | Canola | nucleus | 27.91 | 13.48 |
| EER96424 | Sorghum | cytosol | 29.07 | 13.09 |
| Zm00001d019696_P001 | Maize | cytosol | 28.49 | 12.66 |
| CDX72643 | Canola | nucleus | 25.0 | 12.65 |
| CDY29570 | Canola | nucleus | 24.42 | 12.57 |
| Zm00001d005293_P001 | Maize | cytosol | 27.33 | 12.02 |
| CDY10467 | Canola | cytosol | 22.09 | 11.21 |
| CDY40332 | Canola | cytosol | 22.09 | 11.18 |
| CDY55121 | Canola | cytosol | 22.09 | 11.08 |
| CDY21951 | Canola | nucleus | 18.6 | 10.6 |
| CDY22116 | Canola | nucleus | 18.02 | 10.4 |
| CDX80803 | Canola | cytosol | 23.26 | 8.87 |
| CDX90892 | Canola | nucleus | 1.74 | 1.97 |
| PGSC0003DMT400011487 | Potato | nucleus | 1.74 | 1.63 |
Protein Annotations
| EnsemblPlants:CDY30606 | EnsemblPlantsGene:GSBRNA2T00045891001 | Gene3D:1.10.472.10 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_N |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF216 | PFAM:PF00134 | ProteinID:CDY30606 | ProteinID:CDY30606.1 | ScanProsite:PS00292 |
| SEG:seg | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0004EEDF3E | UniProt:A0A078GYP8 | MapMan:13.1.1.1.4 |
Description
BnaAnng03810DBnaAnng03810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYP8]
Coordinates
chrLK032256:+:153224..155027
Molecular Weight (calculated)
20010.5 Da
IEP (calculated)
4.033
GRAVY (calculated)
-0.267
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEEVEEIQ NAPFCMLFCE EDSSGFDEED EDSCDDKSDE KFPFFHLGFL DRSMSWEEDE LSSLVSKENE FRPSLTEEGV LDDEYLALCR EKAVDWILRV
101: KSHYGFSSLT ALLAVNYFDR FITSRKFQTE FPWMSQLTAL ACLSLAAKVE EVRVPLLVDL QDRREIKPYI LC
101: KSHYGFSSLT ALLAVNYFDR FITSRKFQTE FPWMSQLTAL ACLSLAAKVE EVRVPLLVDL QDRREIKPYI LC
001: MALEEEEESQ NAPFCVLDGL FCEEESEFHE QVDLCDESVE KFPFLNLGLS DHDMLWDDDE LSTLISKQEP CLYDEILDDE FLVLCREKAL DWIFKVKSHY
101: GFNSLTALLA VNYFDRFITS RKFQTDKPWM SQLTALACLS LAAKVEEIRV PFLLDFQVEE ARYVFEAKTI QRMELLVLST LDWRMHPVTP ISFFDHIIRR
201: YSFKSHHQLE FLSRCESLLL SIIPDSRFLS FSPSVLATAI MVSVIRDLKM CDEAVYQSQL MTLLKVDSEK VNKCYELVLD HSPSKKRMMN WMQQPASPIG
301: VFDASFSSDS SNESWVVSAS ASVSSSPSSE PLLKRRRVQE QQMRLSSINR MFFDVLSSSP R
101: GFNSLTALLA VNYFDRFITS RKFQTDKPWM SQLTALACLS LAAKVEEIRV PFLLDFQVEE ARYVFEAKTI QRMELLVLST LDWRMHPVTP ISFFDHIIRR
201: YSFKSHHQLE FLSRCESLLL SIIPDSRFLS FSPSVLATAI MVSVIRDLKM CDEAVYQSQL MTLLKVDSEK VNKCYELVLD HSPSKKRMMN WMQQPASPIG
301: VFDASFSSDS SNESWVVSAS ASVSSSPSSE PLLKRRRVQE QQMRLSSINR MFFDVLSSSP R
Arabidopsis Description
CYCD3-3CYCD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VE15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.