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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 2
  • mitochondrion 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, vacuole
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX72313 nucleus
CDX79732 nucleus
CDX84949
CDX90857
CDX94550
CDY03883
CDY13444 nucleus
CDY16672
CDY21298
CDY24170
CDY27590
CDY36943
CDY46773 nucleus
CDY51595

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G63370.1 CDX84949 AT2G26430.1 20706207
AT5G63370.1 CDY03883 AT2G26430.1 20706207
AT5G63370.1 CDY27590 AT2G26430.1 20706207
AT5G63370.1 CDY51595 AT2G26430.1 20706207
AT5G63370.1 CDX79732 AT2G37340.1 23404887
AT5G63370.1 CDY46773 AT2G37340.1 23404887
AT5G63370.1 CDX79732 AT2G37340.1 23404887
AT5G63370.1 CDY46773 AT2G37340.1 23404887
AT5G63370.1 CDX90857 AT3G24690.1 20706207
AT5G63370.1 CDX94550 AT3G24690.1 20706207
AT5G63370.1 CDY16672 AT3G24690.1 20706207
AT5G63370.1 CDY21298 AT3G24690.1 20706207
AT5G63370.1 CDY24170 AT3G47620.1 21798944
AT5G63370.1 CDY36943 AT3G47620.1 21798944
AT5G63370.1 CDX72313 AT4G31580.1 23404887
AT5G63370.1 CDY13444 AT4G31580.1 23404887
AT5G63370.1 CDX72313 AT4G31580.1 23404887
AT5G63370.1 CDY13444 AT4G31580.1 23404887
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45733 Canola cytosol, plastid, vacuole 98.03 98.03
Bra029230.1-P Field mustard cytosol, mitochondrion 99.34 46.04
PGSC0003DMT400092022 Potato cytosol 53.29 37.33
CDX87018 Canola cytosol 41.45 26.58
PGSC0003DMT400086876 Potato cytosol 53.95 26.03
CDX68497 Canola cytosol 43.42 22.45
AT5G63370.1 Thale cress nucleus 90.13 22.39
CDX83047 Canola cytosol 43.42 21.15
CDY66197 Canola cytosol 44.08 19.82
CDY31856 Canola cytosol 40.13 19.3
CDY01345 Canola cytosol 40.13 19.3
CDX87588 Canola cytosol 39.47 19.17
CDX88294 Canola cytosol 39.47 19.17
CDX76164 Canola cytosol 38.16 19.08
CDY13189 Canola cytosol 38.16 19.08
CDY56886 Canola nucleus 61.18 18.16
CDX87784 Canola cytosol 31.58 18.05
CDY07716 Canola cytosol 36.18 17.8
CDY62439 Canola cytosol, nucleus, plasma membrane 36.18 17.74
CDY37922 Canola nucleus 61.84 17.74
CDY05870 Canola cytosol, plastid 43.42 17.41
CDX96131 Canola cytosol 36.84 16.14
CDY36228 Canola cytosol 36.84 16.14
CDX96739 Canola cytosol 41.45 16.03
CDY60132 Canola cytosol 41.45 15.87
CDX81858 Canola cytosol 40.13 15.68
CDY21722 Canola cytosol 40.13 15.68
CDY01821 Canola nucleus 71.71 15.64
CDX73001 Canola cytosol 40.79 15.62
CDX96081 Canola nucleus 71.71 15.37
CDX83876 Canola cytosol 38.82 14.94
CDY60036 Canola cytosol 42.11 13.68
CDX81189 Canola cytosol, nucleus, plastid 33.55 11.72
CDY09272 Canola cytosol 35.53 11.71
CDX76497 Canola cytosol 35.53 11.71
CDY38979 Canola cytosol 33.55 11.64
CDY49306 Canola cytosol 36.18 11.51
CDY13047 Canola cytosol 34.21 11.18
CDY01580 Canola cytosol 33.55 11.06
CDY39427 Canola cytosol 34.21 10.83
CDY23116 Canola endoplasmic reticulum, nucleus, plasma membrane 33.55 9.06
CDY67496 Canola cytosol 3.29 1.58
CDX87783 Canola extracellular, mitochondrion 0.66 0.85
CDY26373 Canola mitochondrion 0.0 0.0
Protein Annotations
Gene3D:1.10.510.10MapMan:50.2.7GO:A0A078JRK7UniProt:A0A078JRK7EnsemblPlants:CDY69065ProteinID:CDY69065
ProteinID:CDY69065.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00082628001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069PFscan:PS50011PANTHER:PTHR24056PANTHER:PTHR24056:SF332InterPro:Prot_kinase_domSMART:SM00220
SUPFAM:SSF56112UniParc:UPI0004EEE202::::
Description
BnaCnng61700DBnaCnng61700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRK7]
Coordinates
chrLK038558:+:1740..2528
Molecular Weight (calculated)
17248.0 Da
IEP (calculated)
9.086
GRAVY (calculated)
-0.180
Length
152 amino acids
Sequence
(BLAST)
001: MVITQWYRPP ELLLGAKQYS TAVDMWSIGC IMAELLSQKP LFPGKTELDQ LQKIFAVLGT PNESIWPGFS SLPNSKAKFP TQSYNLLRKK FPAISFVGGQ
101: ILSERGFDLL NGLLTLDPEK RLTVEEALNH SWFHEVPLPK AQDFMPTFPP RR
Best Arabidopsis Sequence Match ( AT5G63370.7 )
(BLAST)
001: MAAGGVDVSR SSVAVKKDYD FYRNGSRDVY VRQSGRDDER RQIKRPSDHD LRRNDGRHRS RLAYEKGELR EEAEVQRPSE KRRKFSPIVW NAEKVGRAPS
101: REKTKSPFPV PTTTVISNQA VAGKTTSNDQ VNALMSPEPS YLAPVQPSEA LLAVKHPVDD LEEGQLEEEQ VMQEDVKEGL LEEEQVMQEP NIKTSRWGTG
201: LTSPKEELIS VNVSKTNRWN RSSLTPECEE VMVSEEQQCY SSGSGSGHLS VEKLSADGNS GREYYSSDHD ELEHEDQDSL TPGEMNMMFG SRSVNEFQKL
301: NKINEGTYGI VYKARDEKTK EIVALKKIKM KEDRFEEEYG FPLTSLREIN ILLSCNHPAI VNVKEVVVGG KNDNDVYMVM EHLEHDLRGV MDRRKEPFST
401: SEVKCLMMQL LDGLKYLHTN WIIHRDLKPS NLLMNNCGEL KICDFGMARQ YGSPIKPYTQ MVITQWYRPP ELLLGAKEYS TAVDMWSVGC IMAELLSQKP
501: LFPGKSELDQ LQKIFAVLGT PNEAIWPGFS SFPNAKAKFP TQPYNMLRKK FPAISFVGGQ ILSERGFDLL NSLLTLDPEK RLTVEDALNH GWFHEVPLPK
601: SKDFMPTYPP KR
Arabidopsis Description
CDKG1Cyclin-dependent kinase G1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGW5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.