Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P36640_001 | Banana | nucleus | 56.77 | 52.85 |
| GSMUA_Achr8P12510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 39.74 | 47.4 |
| GSMUA_Achr11P... | Banana | nucleus | 39.3 | 45.0 |
| GSMUA_Achr5P20430_001 | Banana | nucleus | 37.12 | 44.74 |
| GSMUA_Achr2P11790_001 | Banana | nucleus | 39.3 | 44.34 |
| GSMUA_Achr11P... | Banana | nucleus | 36.24 | 44.15 |
| PGSC0003DMT400076291 | Potato | nucleus | 38.86 | 42.58 |
| Solyc09g091780.2.1 | Tomato | nucleus | 38.43 | 41.9 |
| GSMUA_Achr1P00900_001 | Banana | nucleus | 34.06 | 41.27 |
| KRG92238 | Soybean | nucleus | 40.17 | 41.07 |
| GSMUA_Achr5P12920_001 | Banana | nucleus | 39.3 | 40.72 |
| GSMUA_Achr4P26490_001 | Banana | nucleus | 37.55 | 39.45 |
| GSMUA_Achr5P21770_001 | Banana | nucleus | 50.22 | 39.38 |
| CDY59640 | Canola | nucleus | 21.4 | 38.89 |
| PGSC0003DMT400019919 | Potato | nucleus | 38.86 | 38.03 |
| Solyc12g098310.1.1 | Tomato | nucleus | 37.55 | 37.07 |
| CDX79470 | Canola | nucleus | 39.3 | 36.29 |
| CDY23793 | Canola | nucleus | 37.55 | 35.25 |
| Bra022897.1-P | Field mustard | nucleus | 38.43 | 35.2 |
| CDX84726 | Canola | nucleus | 37.55 | 34.82 |
| Bra021808.1-P | Field mustard | nucleus | 36.24 | 34.58 |
| CDY19160 | Canola | nucleus | 36.68 | 34.57 |
| VIT_05s0029g00040.t01 | Wine grape | nucleus | 37.99 | 33.59 |
| CDY12181 | Canola | nucleus | 33.62 | 32.22 |
| Bra005565.1-P | Field mustard | nucleus | 31.44 | 31.86 |
| AT2G32710.1 | Thale cress | nucleus | 38.43 | 30.45 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | InterPro:CDI | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0007050 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0071901 |
| EnsemblPlantsGene:GSMUA_Achr1G20410_001 | EnsemblPlants:GSMUA_Achr1P20410_001 | EnsemblPlants:GSMUA_Achr1T20410_001 | UniProt:M0S1J9 | PFAM:PF02234 | PIRSF:PIRSF017811 |
| PANTHER:PTHR10265 | PANTHER:PTHR10265:SF41 | UniParc:UPI0002959286 | SEG:seg | : | : |
Description
Putative Cyclin-dependent kinase inhibitor 3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G20410_001]
Coordinates
chr1:-:15363461..15365144
Molecular Weight (calculated)
24750.9 Da
IEP (calculated)
10.167
GRAVY (calculated)
-0.685
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKAPGSGMA KYARQVRISG EAAVADAAHQ QSSFGVHTRA KTLALKRLQE SSPAEAYSYL QLRNRRLQKH LPAPSSVRSR PAAKNTLSAN PNSGPTPKFS
101: SNPPAGMGES RAAVAVREAS SKDDAGSEAS FGENVLELEA SRSARESTPC SLIRNSDTIG SPGSTTRPTK FIVSSKRQAS SIVPTDPEME ELFAGPEQLQ
201: QSRFIERYNF DVAKDQPLPG RYEWVKLDS
101: SNPPAGMGES RAAVAVREAS SKDDAGSEAS FGENVLELEA SRSARESTPC SLIRNSDTIG SPGSTTRPTK FIVSSKRQAS SIVPTDPEME ELFAGPEQLQ
201: QSRFIERYNF DVAKDQPLPG RYEWVKLDS
001: MGKYMKKSKI TGDISVMEVS KATAPSPGVR TRAAKTLALK RLNSSAADSA LPNDSSCYLQ LRSRRLEKPS SLIEPKQPPR VHRSGIKESG SRSRVDSVNS
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP
Arabidopsis Description
KRP3Inhibitor/interactor with cyclin-dependent kinase [Source:UniProtKB/TrEMBL;Acc:F4K388]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.