Factsheet for Bra005565.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000514.1-P
Bra000822.1-P	nucleus
Bra002662.1-P
Bra003563.1-P	nucleus
Bra006775.1-P
Bra007086.1-P
Bra007901.1-P	endoplasmic reticulum
Bra007982.1-P
Bra007983.1-P
Bra008477.1-P	nucleus
Bra009031.1-P	nucleus
Bra011501.1-P	nucleus
Bra014802.1-P
Bra016143.1-P
Bra017629.1-P	nucleus
Bra017840.1-P	nucleus
Bra018036.1-P
Bra018420.1-P
Bra019898.1-P
Bra020378.1-P
Bra023245.1-P
Bra026274.1-P
Bra028703.1-P
Bra029917.1-P
Bra031463.1-P	nucleus
Bra031745.1-P
Bra033658.1-P	nucleus
Bra033850.1-P
Bra034198.1-P	nucleus
Bra034612.1-P	nucleus
Bra035186.1-P	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32710.1	Bra018420.1-P	AT1G10840.1	20706207
AT2G32710.1	Bra019898.1-P	AT1G10840.1	20706207
AT2G32710.1	Bra031745.1-P	AT1G10840.1	20706207
AT2G32710.1	Bra000514.1-P	AT1G46840.1	20706207
AT2G32710.1	Bra023245.1-P	AT1G46840.1	20706207
AT2G32710.1	Bra033850.1-P	AT1G46840.1	20706207
AT2G32710.1	Bra007901.1-P	AT1G70210.1	20407024
AT2G32710.1	Bra007982.1-P	AT1G71380.1	20706207
AT2G32710.1	Bra007983.1-P	AT1G71380.1	20706207
AT2G32710.1	Bra016143.1-P	AT1G71380.1	20706207
AT2G32710.1	Bra000822.1-P	AT1G80370.1	20407024
AT2G32710.1	Bra003563.1-P	AT1G80370.1	20407024
AT2G32710.1	Bra008477.1-P	AT1G80370.1	20407024
AT2G32710.1	Bra031463.1-P	AT1G80370.1	20407024
AT2G32710.1	Bra035186.1-P	AT1G80370.1	20407024
AT2G32710.1	Bra018036.1-P	AT3G48750.1	11449057
AT2G32710.1	Bra029917.1-P	AT3G48750.1	11449057
AT2G32710.1	Bra018036.1-P	AT3G48750.1	20706207
AT2G32710.1	Bra029917.1-P	AT3G48750.1	20706207
AT2G32710.1	Bra007086.1-P	AT3G54650.1	18948957
AT2G32710.1	Bra014802.1-P	AT3G54650.1	18948957
AT2G32710.1	Bra034198.1-P	AT4G03270.1	20407024
AT2G32710.1	Bra026274.1-P	AT4G28230.1	20706207
AT2G32710.1	Bra011501.1-P	AT4G34160.1	20407024
AT2G32710.1	Bra017629.1-P	AT4G34160.1	20407024
AT2G32710.1	Bra034612.1-P	AT4G34160.1	20407024
AT2G32710.1	Bra017840.1-P	AT4G37630.1	20407024
AT2G32710.1	Bra028703.1-P	AT5G07310.1	20706207
AT2G32710.1	Bra009031.1-P	AT5G10440.1	20407024
AT2G32710.1	Bra033658.1-P	AT5G43080.1	20407024
AT2G32710.1	Bra002662.1-P	AT5G58290.1	20706207
AT2G32710.1	Bra006775.1-P	AT5G58290.1	20706207
AT2G32710.1	Bra020378.1-P	AT5G58290.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12181	Canola	nucleus	82.3	77.82
CDY59640	Canola	nucleus	35.84	64.29
Bra021808.1-P	Field mustard	nucleus	59.73	56.25
Bra022897.1-P	Field mustard	nucleus	58.41	52.8
AT2G32710.1	Thale cress	nucleus	57.52	44.98
HORVU3Hr1G064490.1	Barley	nucleus	12.83	40.28
GSMUA_Achr1P00900_001	Banana	nucleus	33.63	40.21
EER91497	Sorghum	cytosol	33.19	39.27
PGSC0003DMT400076291	Potato	nucleus	36.28	39.23
Solyc09g091780.2.1	Tomato	nucleus	36.28	39.05
Zm00001d014046_P001	Maize	nucleus	32.74	38.54
Bra036159.1-P	Field mustard	nucleus	32.74	38.54
GSMUA_Achr5P20430_001	Banana	nucleus	32.3	38.42
Solyc12g098310.1.1	Tomato	nucleus	39.38	38.36
PGSC0003DMT400019919	Potato	nucleus	39.38	38.03
GSMUA_Achr8P12510_001	Banana	cytosol, mitochondrion, nucleus, plastid	32.3	38.02
KRG92238	Soybean	nucleus	37.61	37.95
TraesCS1B01G168900.1	Wheat	cytosol, nucleus, plastid	33.63	37.44
Os10t0471700-02	Rice	nucleus	31.86	37.11
GSMUA_Achr11P...	Banana	nucleus	32.74	37.0
GSMUA_Achr11P...	Banana	nucleus	30.53	36.7
TraesCS1D01G148400.2	Wheat	cytosol, nucleus, plastid	32.74	36.45
TraesCS1A01G151400.1	Wheat	nucleus	32.3	35.96
Bra013240.1-P	Field mustard	nucleus	31.42	35.68
Bra037459.1-P	Field mustard	nucleus	31.86	34.78
EER95545	Sorghum	nucleus	32.74	34.74
Zm00001d048363_P001	Maize	nucleus	32.74	34.42
GSMUA_Achr4P26490_001	Banana	nucleus	33.19	34.4
Zm00001d027585_P001	Maize	nucleus	32.3	34.27
Os03t0137800-01	Rice	mitochondrion, nucleus, plastid	32.74	33.48
GSMUA_Achr2P11790_001	Banana	nucleus	29.2	32.51
GSMUA_Achr5P12920_001	Banana	nucleus	31.42	32.13
TraesCS5A01G506500.1	Wheat	nucleus	29.65	32.06
VIT_05s0029g00040.t01	Wine grape	nucleus	36.73	32.05
GSMUA_Achr1P20410_001	Banana	nucleus	31.86	31.44
HORVU3Hr1G064580.1	Barley	nucleus	18.14	31.3
HORVU5Hr1G031690.1	Barley	extracellular	14.16	29.09
GSMUA_Achr6P36640_001	Banana	nucleus	30.97	28.46
HORVU1Hr1G040110.3	Barley	nucleus, plastid	24.34	27.78
TraesCS4D01G332500.1	Wheat	nucleus	26.55	27.4
Zm00001d032732_P002	Maize	mitochondrion	23.01	26.8
GSMUA_Achr5P21770_001	Banana	nucleus	30.97	23.97
HORVU4Hr1G080410.1	Barley	nucleus	32.3	19.57

Protein Annotations

MapMan:13.1.1.3.1	Gene3D:4.10.365.10	EnsemblPlantsGene:Bra005565	EnsemblPlants:Bra005565.1	EnsemblPlants:Bra005565.1-P	InterPro:CDI
GO:GO:0003674	GO:GO:0004861	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0007049	GO:GO:0007050	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0030234	GO:GO:0071901	UniProt:M4CMX7	PFAM:PF02234	PIRSF:PIRSF017811
PANTHER:PTHR10265	PANTHER:PTHR10265:SF41	UniParc:UPI00025475CD	SEG:seg	:	:

Description

AT2G32710 (E=8e-029) KRP4, ACK2, ICK7 | KRP4; cyclin binding / cyclin-dependent protein kinase inhibitor

Coordinates

chrA05:-:6252665..6254188

Molecular Weight (calculated)

25098.1 Da

IEP (calculated)

9.681

GRAVY (calculated)

-1.054

Length

226 amino acids

Sequence
(BLAST)

001: MGKYMRKSKL DGEAISLMEV SPSSSSSSSL GVLTRAKSLA LQRKPSSSFS LPTSPSPNQK TTDCGGSYLQ LRSRRLQKKP PIVVIKRRKQ QLRRKESCGR
101: NSKSDSVAES DGKEKVLSDE INNNKGSSSE SLNRSTSEST PCTLNREAEI NTSLGSSKKL NNGISDNSDQ IEENLSGSHR PTTPDMDRFF SGAEEEQQKQ
201: FIDKYNFDPV NEQPLPGRFE WEKVDN

Best Arabidopsis Sequence Match ( AT2G32710.1 )
(BLAST)

001: MGKYIRKSKI DGAGAGAGGG GGGGGGGESS IALMDVVSPS SSSSLGVLTR AKSLALQQQQ QRCLLQKPSS PSSLPPTSAS PNPPSKQKMK KKQQQMNDCG
101: SYLQLRSRRL QKKPPIVVIR STKRRKQQRR NETCGRNPNP RSNLDSIRGD GSRSDSVSES VVFGKDKDLI SEINKDPTFG QNFFDLEEEH TQSFNRTTRE
201: STPCSLIRRP EIMTTPGSST KLNICVSESN QREDSLSRSH RRRPTTPEMD EFFSGAEEEQ QKQFIEKYNF DPVNEQPLPG RFEWTKVDD

Arabidopsis Description

KRP4Cyclin-dependent kinase inhibitor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.