Factsheet for Os10t0471700-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
extracellular 3
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

nucleus: 21558459

gfp PMID: 21558459 doi

R Yang, Q Tang, H Wang, X Zhang, G Pan, H Wang, J Tu

Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Kaixuan Road 268, Hangzhou, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0123100-01
Os02t0325100-01
Os03t0203800-01	nucleus
Os03t0208700-00	nucleus
Os03t0208800-00	nucleus
Os03t0607600-00	nucleus
Os03t0617500-01	nucleus
Os03t0633100-00
Os03t0633400-01
Os04t0376500-01
Os04t0443300-00
Os06t0236600-00	endoplasmic reticulum
Os07t0556000-01	nucleus
Os09t0111100-01	nucleus
Os09t0382300-00	endoplasmic reticulum
Os12t0502300-01	nucleus
Os12t0581800-01	nucleus
Os12t0588800-01	nucleus
Os12t0601000-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32710.1	Os04t0376500-01	AT1G10840.1	20706207
AT2G32710.1	Os06t0236600-00	AT1G70210.1	20407024
AT2G32710.1	Os09t0382300-00	AT1G70210.1	20407024
AT2G32710.1	Os04t0443300-00	AT1G71380.1	20706207
AT2G32710.1	Os12t0502300-01	AT1G80370.1	20407024
AT2G32710.1	Os02t0123100-01	AT3G48750.1	11449057
AT2G32710.1	Os02t0123100-01	AT3G48750.1	20706207
AT2G32710.1	Os03t0633100-00	AT3G54650.1	18948957
AT2G32710.1	Os03t0633400-01	AT3G54650.1	18948957
AT2G32710.1	Os12t0601000-00	AT3G54650.1	18948957
AT2G32710.1	Os07t0556000-01	AT4G03270.1	20407024
AT2G32710.1	Os09t0111100-01	AT4G34160.1	20407024
AT2G32710.1	Os03t0203800-01	AT4G37630.1	20407024
AT2G32710.1	Os03t0617500-01	AT4G37630.1	20407024
AT2G32710.1	Os12t0588800-01	AT4G37630.1	20407024
AT2G32710.1	Os03t0208700-00	AT5G43080.1	20407024
AT2G32710.1	Os03t0208800-00	AT5G43080.1	20407024
AT2G32710.1	Os03t0607600-00	AT5G43080.1	20407024
AT2G32710.1	Os12t0581800-01	AT5G43080.1	20407024
AT2G32710.1	Os02t0325100-01	AT5G58290.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G148400.2	Wheat	cytosol, nucleus, plastid	69.59	66.5
TraesCS1B01G168900.1	Wheat	cytosol, nucleus, plastid	69.59	66.5
TraesCS1A01G151400.1	Wheat	nucleus	69.07	66.01
Zm00001d014046_P001	Maize	nucleus	64.43	65.1
EER91497	Sorghum	cytosol	63.92	64.92
GSMUA_Achr8P12510_001	Banana	cytosol, mitochondrion, nucleus, plastid	52.06	52.6
GSMUA_Achr11P...	Banana	nucleus	52.58	51.0
Os03t0137800-01	Rice	mitochondrion, nucleus, plastid	57.73	50.68
GSMUA_Achr5P20430_001	Banana	nucleus	49.48	50.53
GSMUA_Achr11P...	Banana	nucleus	46.39	47.87
GSMUA_Achr2P11790_001	Banana	nucleus	50.0	47.78
GSMUA_Achr1P00900_001	Banana	nucleus	44.85	46.03
GSMUA_Achr5P12920_001	Banana	nucleus	48.97	42.99
HORVU1Hr1G040110.3	Barley	nucleus, plastid	43.81	42.93
KRG92238	Soybean	nucleus	47.94	41.52
PGSC0003DMT400076291	Potato	nucleus	43.81	40.67
Solyc09g091780.2.1	Tomato	nucleus	43.3	40.0
GSMUA_Achr4P26490_001	Banana	nucleus	44.85	39.91
PGSC0003DMT400019919	Potato	nucleus	46.91	38.89
Solyc12g098310.1.1	Tomato	nucleus	46.39	38.79
CDY59640	Canola	nucleus	23.2	35.71
CDX84726	Canola	nucleus	44.85	35.22
VIT_05s0029g00040.t01	Wine grape	nucleus	46.91	35.14
CDX79470	Canola	nucleus	43.81	34.27
Bra022897.1-P	Field mustard	nucleus	43.81	34.0
CDY23793	Canola	nucleus	42.27	33.61
CDY19160	Canola	nucleus	41.75	33.33
Bra021808.1-P	Field mustard	nucleus	41.24	33.33
Bra005565.1-P	Field mustard	nucleus	37.11	31.86
CDY12181	Canola	nucleus	37.63	30.54
AT2G32710.1	Thale cress	nucleus	43.3	29.07

Protein Annotations

MapMan:13.1.1.3.1	Gene3D:4.10.365.10	EntrezGene:4348872	ProteinID:AAG16867.1	ProteinID:AAP54233.2	EMBL:AK073804
ProteinID:BAF26743.1	ProteinID:BAT11263.1	InterPro:CDI	EMBL:DQ229365	ProteinID:EAZ16396.1	GO:GO:0003674
GO:GO:0004860	GO:GO:0004861	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006469	GO:GO:0007049	GO:GO:0007050	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0019538	GO:GO:0030234	GO:GO:0071901	EnsemblPlantsGene:Os10g0471700	EnsemblPlants:Os10t0471700-02
PFAM:PF02234	PIRSF:PIRSF017811	PANTHER:PTHR10265	PANTHER:PTHR10265:SF41	UniProt:Q7XDH8	UniParc:UPI00006C9406
RefSeq:XP_015612960.1	SEG:seg	:	:	:	:

Description

KIP-RELATED PROTEIN 4Similar to cDNA clone:J033067M05, full insert sequence. (Os10t0471700-01);Similar to Cyclin-dependent kinase inhibitor 7. (Os10t0471700-02)

Coordinates

chr10:-:17499846..17503185

Molecular Weight (calculated)

21309.3 Da

IEP (calculated)

8.868

GRAVY (calculated)

-0.518

Length

194 amino acids

Sequence
(BLAST)

001: MGKYMRKAKV VVSGEVVAAA VMELAAAPLG VRTRARSLAL QKRQGGEYLE LRSRRLEKLP PPPPPPPRRR ATAAAATADA TAAESAEAEV SFGGENVLEL
101: EAMERNTRET TPCSLIRDPD TISTPGSTTR RSHSSSHCKV QTPVRHNIIP ASAELEAFFA AEEQRQRQAF IDKYNFDPVN DCPLPGRFEW VKLD

Best Arabidopsis Sequence Match ( AT5G48820.1 )
(BLAST)

001: MGKYMKKSKI TGDISVMEVS KATAPSPGVR TRAAKTLALK RLNSSAADSA LPNDSSCYLQ LRSRRLEKPS SLIEPKQPPR VHRSGIKESG SRSRVDSVNS
101: VPVAQSSNED ECFDNFVSVQ VSCGENSLGF ESRHSTREST PCNFVEDMEI MVTPGSSTRS MCRATKEYTR EQDNVIPTTS EMEEFFAYAE QQQQRLFMEK
201: YNFDIVNDIP LSGRYEWVQV KP

Arabidopsis Description

KRP3Inhibitor/interactor with cyclin-dependent kinase [Source:UniProtKB/TrEMBL;Acc:F4K388]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.