Factsheet for Os03t0633400-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0137800-01
Os10t0471700-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54650.1	Os03t0137800-01	AT2G32710.1	18948957
AT3G54650.1	Os10t0471700-02	AT2G32710.1	18948957

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G388400.1	Wheat	plastid	82.44	49.38
TraesCS5A01G378400.1	Wheat	plastid	83.04	49.29
EER93780	Sorghum	plastid	83.33	47.14
TraesCS5B01G382000.4	Wheat	plastid	72.92	46.67
HORVU5Hr1G093590.1	Barley	extracellular	81.25	46.59
GSMUA_Achr4P28520_001	Banana	cytosol, mitochondrion	63.1	45.2
GSMUA_Achr4P21010_001	Banana	mitochondrion	65.77	45.19
Zm00001d033321_P001	Maize	plastid	76.19	44.37
Os12t0601000-00	Rice	plastid	73.51	44.11
GSMUA_Achr2P12640_001	Banana	plastid	65.18	38.97
VIT_07s0141g00330.t01	Wine grape	plastid	59.23	34.67
KRG95622	Soybean	nucleus, plastid	61.01	34.17
CDY55831	Canola	mitochondrion	50.0	33.87
KRH67292	Soybean	cytosol	53.27	33.58
CDY64339	Canola	plastid	56.55	33.57
KRH71335	Soybean	nucleus	58.63	33.39
CDX78253	Canola	plastid	55.65	33.33
CDX73462	Canola	plastid	55.36	33.21
KRH32101	Soybean	nucleus	57.74	32.77
PGSC0003DMT400051898	Potato	cytosol	57.44	32.71
Solyc06g084060.2.1	Tomato	cytosol, nucleus, plastid	56.85	32.32
Bra007086.1-P	Field mustard	plastid	55.06	31.9
Solyc09g065880.2.1	Tomato	nucleus	55.95	31.76
AT3G54650.1	Thale cress	plastid	55.36	31.37
PGSC0003DMT400049672	Potato	nucleus	55.36	31.26
Bra014802.1-P	Field mustard	plastid	55.36	23.75
KRG90050	Soybean	cytosol	1.49	8.62
HORVU5Hr1G093570.1	Barley	plastid	0.0	0.0
Os03t0633100-00	Rice	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Os03t0633400-01	EnsemblPlantsGene:Os03g0633400	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44840
ProteinID:BAS85382.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52047	UniParc:UPI000393B1BD	UniProt:A0A0P0W0E8
MapMan:19.2.2.8.1.4.6	:	:	:	:	:

Description

F-box protein 156Similar to Leucine Rich Repeat family protein, expressed. (Os03t0633400-01)

Coordinates

chr3:+:24193288..24197393

Molecular Weight (calculated)

36405.4 Da

IEP (calculated)

7.779

GRAVY (calculated)

0.054

Length

336 amino acids

Sequence
(BLAST)

001: GFLNLNSSSL SILWLSDLCS LSKSVINCPN MSEISLCFTQ QSNDCTDLVT LMDGLGRTCP NLKNMHISSA QLSNEAVFAL EGASLRGLCM LSLILGSKIT
101: DAAVASIVRS CASLELLDLS GSSISDNGVG MICKAFPHTL SRLLLALCPN VTTCGIQFAT AQLPLLQLMD CGMTLCASLQ NEKQGPYFGE INGAIRFCPK
201: LPTSKKQSTN QKLIIKHGNL KKLSLWGCSA IDALYLNCPE LNDLNLNSCT NLNPERLLLQ CPKLKNVHAS GCHDMLIGAI RNQVLNEFAA AEPHLPCKRL
301: ADGSKRVQLP QFAQQEPSQD KKGIDLRRNQ CTVHLD

Best Arabidopsis Sequence Match ( AT3G54650.1 )
(BLAST)

001: MQPQPHISPN TATAAISAAL ESQRSRKNRG SYNCGRCGQP KKGHVCLLTA PPDIPTTPIA SEPVSCISAA ASSSRSTVLS LTAAPSSRQT FTHLRRALSF
101: DDVDARNSLD ESDLDAASMD LDLQLDTDIV QPGRFHAVGL WEVLKRLPPS SLLMAARVCK GWRETSRKMW KAAEELRIRV PERAQIGYIG SLLQKCPRLI
201: RLSLKIESDF DATTLACIAF SCPNLEVLEI TTSGAAVNRI SGDELSRFVA NKRGLTSLKM EGCSNLGGFS LSSSSLSTLW LSDLHSLSKM IFNCPNLTEI
301: SLEFSRQEDD STDLVTMVDG LGRTCTRLQN IHIASLKLSH TVVLSLTAVN FRYLRMLSLV LGINITDASV AAISSGYKNL ELLDLSGSSI TDTGLGMICD
401: VLPDTLSKLL VALCPNITSS GIQFATAQLP LLELMDCGMT VSDPNSDNPT FVENPSPHKT PGYNQKMFIK HKRLKKLSLW GCSSLDALFL NCPELMDLNL
501: NLCSNLHPES LVLQCPKLQL VYASGCQGLL TGAIRKQVSE NFSAGENHMP RKRLADASKR IQALPSLYQE TREDGIYAGK RRKLEKEMCT IIH

Arabidopsis Description

FBL17F-box/LRR-repeat protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8W104]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.